KEGG   Daphnia magna (water flea): 123466277
Entry
123466277         CDS       T07514                                 
Name
(RefSeq) cullin-4A-like
  KO
K10609  cullin 4
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03420  Nucleotide excision repair
dmk04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123466277
  09124 Replication and repair
   03420 Nucleotide excision repair
    123466277
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dmk04121]
    123466277
   03400 DNA repair and recombination proteins [BR:dmk03400]
    123466277
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dmk04147]
    123466277
Ubiquitin system [BR:dmk04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     123466277
DNA repair and recombination proteins [BR:dmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      123466277
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      123466277
Exosome [BR:dmk04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   123466277
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 Lipocalin
Other DBs
NCBI-GeneID: 123466277
NCBI-ProteinID: XP_032789883
LinkDB
Position
LG7:complement(551907..555878)
AA seq 781 aa
MSQPTGKLIGVKRKHSDENQVEAKKPAMEETKRANFSALVNTNGLTKTSPAVGKPTAGNV
KKIVIKSMKELPRLPENYQDVAWQKLEEAVVAIQNSTSIKSALEDLYQAVQNLCSHSFAP
LVYSKLKSLTEAHVQSNLAQFLAESIDPCVFLKMMNDCWQSHCQQMILIRGIFLYLDRKY
VLQNPGVLSLWDMGLDTFKVYIISDPLVQTRTVDGLLLLIDKERQGDTVDRSLLKSLLRM
LSDLGIYHEAFETKFLSSTEQVYRTEGQRLMQEREVPEYLLHVDKRLHEENERLLHYLDH
STKRALISTVEKQLIGEHLVPILQKGLDALVEENRISDLKLMYNLLSRVKNGPQELNTSF
CTYVKKRGRTIVIDPEKDKTMVQELLDFKEKLDNIVVTCFGRNEKSVNSLKESFENFVNQ
RLNKPAELIAKFVDSKLRSGNKESTEEEMERLLDKIMVLFRFIHGKDVFEAFYKKDLAKR
LLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINIAFKQYLAHLNQPEL
INMDLTVNILTMGYWPTYAPSEVTLPAEMVQFQETFKKFYLGKHSGRKLQWQPSLGMCVL
KASFPLATKELQVSLFQTLVLLLFNAADELPFEEIKAATNIEDAELRRTLQSLACGKARV
LRKVPAGKDILDGDKFTYYKDFTNKLFRIKINQIQLKETTEEQQATEERVFQDRQYQIDA
AIVRIMKMRKTLTHNLLITELYNQLNFPVKPADLKKRIESLIDRDYMERDKDNPNQYNYV
A
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgagtcagccgaccgggaaattgattggagtcaagcgaaagcatagtgacgaaaaccag
gtggaggcaaaaaaacctgccatggaggagaccaaaagagccaatttctctgcattggtc
aataccaatggtttgacaaaaacatctccagctgtagggaaaccaactgcaggaaatgtc
aagaagattgtcatcaagtctatgaaagaactcccaagattgccagaaaattatcaggat
gttgcatggcaaaaactggaagaagctgttgttgccattcagaattcaacctccattaaa
tccgctctagaagacttgtatcaggctgtccaaaacctttgcagtcacagttttgccccc
cttgtgtacagcaagttaaaaagtttgacagaagcacatgtccaatcaaatctagcccag
tttttggcagaatccatcgatccctgtgtgttccttaaaatgatgaatgactgttggcaa
tctcactgccaacaaatgattctcattcgtggcatatttctttatctggatcgtaaatat
gtacttcagaatccaggagtcctgtcgctctgggacatgggtttagacacgtttaaggtc
tacatcataagcgatccactagtccagaccaggacggtcgacggtctgcttttgctcatt
gataaagagcgccaaggtgacactgtagaccgttcactgttgaaatcgctcttgcgcatg
ctctctgaccttggtatctaccacgaagcctttgagaccaagtttttgtcgtcgacggaa
caagtctaccgcactgaagggcagcgcctgatgcaagaacgggaagtgcctgaatatctc
ctccatgttgataaacggttacacgaagagaatgaaaggctacttcactatctcgatcac
tcgaccaagagagcgttaatatccacagtggagaaacagctgattggcgagcacttggtc
cctatcttgcagaaaggattggatgctctagtggaggaaaatcgtatatcggatctgaaa
cttatgtacaatttgctgtcaagagtgaaaaatgggccacaagagcttaacacaagtttc
tgcacatacgttaagaagcgtggcaggaccatcgtaattgatcccgagaaggacaagacg
atggtgcaagaattgttggatttcaaggagaaattagacaacatcgtagttacttgcttc
ggccgtaacgaaaagtctgtcaacagcctcaaggagtcttttgagaactttgtcaatcaa
agattgaacaaaccagcggaacttattgccaaattcgttgattcaaagttacgatctggc
aataaggaatcaactgaggaagagatggaacggttactcgacaaaataatggttttattt
agatttattcacggcaaagatgtttttgaagccttctacaaaaaggatctggctaaaaga
cttttggtgggtaagtcggcgagcgtcgatgccgagaagagtatgctttcaaaactgaaa
caagagtgcggaggcggcttcacgtcaaagcttgagggcatgttcaaagatatggaactc
tcaaaggatatcaacatcgcctttaaacagtatcttgctcatctcaaccaacccgagttg
atcaacatggatctgactgtgaatatcctgacaatgggctattggccaacttatgcacct
agtgaagtcactctgccggccgaaatggtccagtttcaagagacttttaaaaagttttac
ttgggtaaacattctggccgcaagctgcaatggcagccatcactgggcatgtgcgtcttg
aaagcctcgttcccattggctaccaaagagcttcaggtctccttgtttcagactctggtg
cttttgttgttcaacgcggcggatgagttgccattcgaagagatcaaagccgccacgaat
attgaggatgctgaattaagacgaaccttgcaatccctggcatgcggaaaggctcgtgtt
cttcgaaaagtgccagcaggaaaagacattttggatggagataaattcacctattataag
gattttaccaataaattgttcagaatcaagatcaatcagattcagttaaaagaaacgacg
gaagaacaacaagcgacggaagagcgagtgttccaggatcgacaatatcagatcgacgca
gctatcgttcgcataatgaaaatgcgtaagacactcacccacaatctactcattaccgaa
ctgtataatcagctcaacttcccggttaaacccgccgatttgaaaaagaggatcgaatcg
cttatcgatcgagactacatggaacgggacaaggacaatcctaaccagtacaactacgtg
gcgtga

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