Daphnia magna (water flea): 123468041
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Entry
123468041 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor IIIB 90 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmk03021
]
123468041
Transcription machinery [BR:
dmk03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
123468041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
DUF2368
BRF2-like_C_cyclin_rpt
HTH_30
Motif
Other DBs
NCBI-GeneID:
123468041
NCBI-ProteinID:
XP_045023672
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MSSRACQNCGGTDIDVDQSRGIAVCTNCGVVLEENCIVSEVQFEENAYGGASAIGQFVSN
DNQGGTGFINSYRGGNGKQSREITMKRAREKITTMGQQLNLNQHCIDMAVNFYGMALARR
LTNGRKSSHVVAACIYITCRMEGTAHLLIDIADVIDIDVYTLGHNFMQIAKAFNLNIPSV
DPCLYVMRYANRMNFGDKTHEVSRTALRLVQRMKRDWIHTGRRPSGLCGAALLIAARIHG
FNRTVLDVIKEVKVHENTVRKRMQEFGETASSSLTXEEFMQVDLEEEHDPPAFLKSRKKD
RSDKVEEEATEEMVKLEEEINRQIALSLAKKRGPWAKYSKEALQQPVSPASCTSGISSPS
ADPEVDDVIADMTMTAVKECLTPTEVAAVRGEHLTHCRYN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcagagcttgccaaaactgtggtgggacagacattgatgtcgatcaatcgaga
ggcatcgcagtttgtacaaactgtggtgtggtccttgaagaaaattgcattgtttctgaa
gtgcaatttgaagaaaatgcttatggaggtgcatcagccattggacagtttgtatcaaat
gataatcaaggaggcacaggatttatcaacagctaccgtggaggaaatgggaaacaatca
agggaaataactatgaagagggccagggagaaaataacaactatgggacaacaattaaac
ctcaaccaacactgtatagatatggctgtaaacttttacggtatggctctggctcgtcgt
ttgacaaatggcaggaagtcttctcatgttgtggctgcatgcatatatataacttgccga
atggaagggactgcccatcttctgatagatattgcagatgttatagatattgacgtttac
acacttggccataatttcatgcaaattgcgaaagcatttaacttaaatattccatcagtt
gatccttgcctgtacgtcatgcgttatgctaatcgaatgaatttcggtgataaaacacac
gaggtgtccaggactgccttacgtcttgtacagcggatgaaacgtgattggattcacact
ggtcgacggccttctggtctttgcggagcggcattactgattgctgctcgaattcacggc
tttaatcgaacagtgctcgatgttatcaaagaagtcaaggtccacgagaacaccgtacgc
aaacgcatgcaagagtttggcgaaaccgcttcaagtagtctgactntagaagagttcatg
caagtagatctggaagaagagcatgatcctccagcctttcttaaatcgcgtaagaaggac
agaagtgacaaagtcgaagaagaggcgacggaagaaatggttaagctagaggaagagatt
aatcggcagattgctttgagtctggcaaagaaacgaggaccttgggcgaaatattcaaaa
gaggcgcttcaacagccagtctctcctgcttcgtgtaccagtggaataagtagtccatcc
gcggaccctgaggtggatgacgttattgcagacatgacaatgacagccgtcaaggaatgt
ctgactcccactgaagtggccgccgtaagaggcgaacaccttacccactgccggtacaac
tga
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