Daphnia magna (water flea): 123468678
Help
Entry
123468678 CDS
T07514
Name
(RefSeq) uncharacterized RNA pseudouridine synthase slr1592-like
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmk03016
]
123468678
Enzymes [BR:
dmk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
123468678
Transfer RNA biogenesis [BR:
dmk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
123468678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
123468678
NCBI-ProteinID:
XP_045023897
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MSKITQKFKPPLKNGIAASRIYLSQGNGLLLDFLCAHFPHIDRTQWQNRMSAGEVFNAAG
TPQHANSPGIAHSEVFYYRELPAERHIPFYERILYQDAHLLVVDKPHFLPVTPAGDYLQE
TLLTRLRNHTGIVDLSPIHRLDKDTAGVMLFSTQAASRAVYQDLFRQNTVHKTYLAVAPT
NLNLAYPHQRSSRIIERPEQFFLTMETHGSPNSHSTITLLAQHGAHSLYQLEPRTGKNTN
CAYMSALGMPILNDVFYPTAAPVQAADFSKPLQLLAHKLAFTDPISGACHQFISEQALMY
TPPK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaatcacccaaaaattcaaacccccactcaaaaacggcattgccgccagtcgg
atttatttgagccaaggcaacggtttattgcttgattttttatgcgcccattttccacat
attgaccgcacgcaatggcaaaaccgcatgtccgcaggcgaggttttcaacgccgcaggc
acgccgcagcacgcaaacagcccaggcattgcgcacagcgaggttttttattaccgcgaa
ctgcctgccgagcgtcacattccattttatgagcgcattttgtaccaagacgcacattta
ttggtggtggataaaccacattttttgcccgtcacgcctgcgggcgactatttacaagaa
accctgctcacgcgcctacgcaaccacacaggcatcgttgatttaagcccaatccaccgc
ttggacaaagacaccgcaggcgtcatgcttttttcaacccaagccgccagccgcgccgtg
taccaagacttattccgacaaaatactgtgcacaaaacctaccttgccgtcgccccaacc
aacctcaatttggcctatccgcaccagcgcagcagtcgaatcatcgagcgccccgaacag
ttttttttgaccatggaaacccacggcagcccaaacagccacagcaccatcacattgctc
gcgcaacacggcgcgcacagcttgtatcagcttgaaccccgcacaggcaaaaacaccaat
tgcgcttacatgagcgccttgggcatgccgattttaaatgatgtgttttacccaaccgca
gcgcccgttcaggcggcagactttagcaaaccactgcaattattggcacacaaactggcc
tttaccgacccaatcagcggcgcttgccatcaattcattagcgaacaagcgttgatgtat
acaccgccaaaataa
DBGET
integrated database retrieval system
