KEGG   Daphnia magna (water flea): 123468770
Entry
123468770         CDS       T07514                                 
Name
(RefSeq) exosome complex component CSL4-like isoform X1
  KO
K07573  exosome complex component CSL4
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    123468770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmk03019]
    123468770
Messenger RNA biogenesis [BR:dmk03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     123468770
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     123468770
SSDB
Motif
Pfam: EXOSC1 ECR1_N S1_RRP4
Other DBs
NCBI-GeneID: 123468770
NCBI-ProteinID: XP_045023937
LinkDB
Position
Unknown
AA seq 249 aa
MQKKKLPFLIIDVASADEFGCNACHSWQKNQLWQTHSMTSNENSTHTENKCIISTPGQRL
CLAEDKYIGGVGTYTRQGYIMSCLAGVVKITAQPDKRILVEVRSGKEQTVVPSAGDIVTA
RITQVNPRWARCAILCVKEMVLAEPFRGQLRKEDVRATEKDRVEMYKCFRPNDIILARVL
SLGDAHSYVLSTAENELGVVIAYSEEGTPMVPVGWQEMQCPKTYVKEMRKVAKVSPEIIS
NENIKEATN
NT seq 750 nt   +upstreamnt  +downstreamnt
atgcaaaagaaaaagttaccatttctcataatagatgtcgcgtctgcagacgaatttggc
tgtaatgcctgtcattcctggcaaaagaatcaactgtggcaaacacacagcatgacttca
aatgagaattcaacacacactgagaacaaatgcataatttctactccaggacagagacta
tgtcttgcggaagataaatacattggaggtgtggggacatacacaagacaaggctatata
atgtcttgtttggcaggtgttgttaaaataactgcacagcctgataagagaatcctggta
gaagttagaagtggtaaagaacaaacagttgttccatcagctggtgacattgttacagcc
agaataacacaagtaaatccgcgctgggccagatgtgccattttatgtgtaaaggaaatg
gtgttggcagaaccattcagaggacaactccggaaagaagatgtccgcgctacggaaaag
gatagagttgaaatgtacaaatgttttcgacctaacgacataatcttagcaagagtgttg
tcattaggtgatgcccattcctatgtgttgtcaactgcagaaaatgaattaggtgtggtt
attgcatacagtgaagaagggacacctatggttccagttggatggcaagaaatgcagtgt
ccaaaaacctatgtgaaggaaatgcgtaaagttgccaaagtttcacctgaaatcatttca
aacgaaaatattaaagaagcaacaaattga

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