Daphnia magna (water flea): 123470606
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Entry
123470606 CDS
T07514
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmk03016
]
123470606
Enzymes [BR:
dmk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
123470606
Transfer RNA biogenesis [BR:
dmk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
123470606
Prokaryotic type
123470606
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
123470606
NCBI-ProteinID:
XP_045027043
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All DBs
Position
LG3:complement(3042561..3044184)
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AA seq
285 aa
AA seq
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MSITRLQGIFPVFKPRGITSSQLLEVIKIKLNKENTSDTPVKMGHGGTLDINATGVLVVG
INDGCSKLPAFLGGSKVYHSSCVFGRATDSYNKEGKTIMEKSFDHITLSDINSFSTAMKG
QVLQKPPPFSALKFQGKRLSDLAREGTVVDPNPRLVNCYDFKVIEFVLPKLTFELSCSKG
FYVRSLVHDLGLALDSCAYLDELERIRQGPFETDHCLMEEDCTVSGIKQKILDMWQSTEE
YLDCQMTMYRSLNASKNQSQFPVKHKHGGSNKIGKKQSHKWEFVK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcactcggttacaaggcattttcccggtgttcaaaccgcggggtattacttcc
tctcagttgctagaagtcatcaaaataaaactaaataaagaaaacacgagtgacactcct
gttaaaatgggccatggaggaactttagacataaatgccacaggtgtactggtggttggg
atcaatgatggatgttcaaagctgccagccttcttaggtggatcaaaagtctatcattct
agttgtgtgtttggtagagcaactgactcctataacaaggaaggcaaaactatcatggaa
aaatcttttgatcatattacactctctgatataaatagcttttctacagcaatgaaaggg
caggttttacagaagccaccgcctttctccgccttgaagtttcaaggtaaaaggttgtca
gatcttgccagagaaggaacagtggtagatccgaacccacggttggtgaattgttacgac
ttcaaagttattgaatttgtacttcccaaactaacatttgagctatcatgtagcaaaggt
ttctatgtacgcagcctggttcatgatttaggattagctttagatagctgtgcttacctc
gacgaattggagaggattcgacaaggtccttttgaaaccgatcattgtctgatggaggaa
gattgcacagtttcaggtattaaacagaaaattcttgatatgtggcaaagtacagaggaa
tatctagattgtcaaatgaccatgtaccgctcattaaatgcctccaaaaatcaaagtcag
ttccctgtgaaacataagcacggtggatcaaacaagattgggaaaaaacagtcgcataaa
tgggaatttgtcaaataa
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