Daphnia magna (water flea): 123471025
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Entry
123471025 CDS
T07514
Name
(RefSeq) DNA polymerase subunit gamma-1-like
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123471025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmk03032
]
123471025
03029 Mitochondrial biogenesis [BR:
dmk03029
]
123471025
Enzymes [BR:
dmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
123471025
DNA replication proteins [BR:
dmk03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
123471025
Mitochondrial biogenesis [BR:
dmk03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
123471025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
Motif
Other DBs
NCBI-GeneID:
123471025
NCBI-ProteinID:
XP_045027779
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All DBs
Position
LG4:complement(5820492..5824974)
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AA seq
1152 aa
AA seq
DB search
MLPRSIHRQIFLKDSTSTISRESVMKIQEHLSNHKLYGKSVSSLPDIDLKLPVLQGQNIA
EHFKKIAEKQCGNYIKKLLDLASHGIPDIPKVWNFSPGWTKYSISGETDQVDFPDEEAYV
FDVEVCVKEGHLPTLATAVSKNFWYSWCSNQLFEEKKVKDSILKTMGNIYELKDLINLES
KREQDRLILKDQKERIIVGHNVSYDRSRLKEQYFIEGTKVRFLDTMSLHIAISGITSFQR
NMLIAAKSGTNDKTLKNQQYRSKSGKTEDILEWQNICSFNGLSDVHKLYCGGLGLDKEKR
DVFVTGTLSDITEDFQQLATYCARDCQATYEVLCVLIPEYQKRFPHPVTLAGMLEMSTAY
LPVNRNWQRYLQDSEDTYRDLENELTQSLKREADRAAHMITDKAYKGDPWLWNLDWSTKP
LKVKKAATLVKKKKKTENVVPSIIVDGEGEDQLNEDEAGLHEIKRLKQQFQELFDTKNHL
FKRNSFLPGYPNWYCLLCDRVQDGLVGPSEVSTSAQVVPKLLKLTWDGYPLFHSRALGWG
YLVPGRPLDLSRQDENVIPFPLKEAFSLSPPRIAEQNLSTQGIITAEEALMQLGQMTDLS
ADPLELAVHWQAIRRGLNNNMEHEKDVFPVGDQSQKKHSHYLTSDRPAWHLGIGPYDVGI
PGCWFFRLPHKSGVDNNVGNPLAKDYLNKIEDGTLKATSSSIAEHILKLNRNIIYWRNAR
DRIISQMVVWLRQSQLPRSVTNSDNFDPSNRYGAILPQVITSGTLTRRAVESTWLTASNA
YKDRLGSELKAMIQCPPGFNFVGADVDSQELWIASIIGDSHFAGQHGSTAFGWMTLQGKK
SDGTDMHSRTALAVDITRDQAKVLNYGRIYGAGERFAKTLLMQFNHRLTEKEAAEKARKM
YSITKGNSVFKLNSRGRQLAFALGHASDETVTLEQLNNIRKNAKKDNKFAYLARLPTEDL
IDRRMWSGGTESHMFNKLEEIAQSKAPETPVLHCRISRALEPCNVGNEFMTSRVNWVVQS
SAVDYLHLMIVAMRYLLDVYKIEGRFSISIHDEVRYIIKEDDKFRAALALQIANLWTRCM
FSYQMNLYDLPQAVAFFSSVDIDTVLRKETNMDCQTPSNPYGLKQGYRIDFGCSYDIYQI
LEKTGGSLDLNR
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgctacctagatcaattcatcgccagatattcttaaaggacagcactagtacaatatct
cgtgaatcggtcatgaagattcaagaacatttgtccaatcataaactatatggtaaatca
gtgagtagtcttcctgacattgatttgaagcttccagtgttacaaggccaaaatattgcc
gaacacttcaaaaaaattgctgagaaacagtgtggaaattacattaagaaattgttagat
ttggcatcacatggaattccagacattccaaaagtttggaacttttctcctggttggaca
aaatatagcattagtggtgaaacagatcaggttgatttcccagatgaagaagcatatgtc
tttgatgtggaagtctgtgttaaagagggtcatttaccaacattagctacagcagtttct
aaaaatttttggtactcttggtgcagcaatcagctctttgaggagaaaaaggtgaaagat
tctattctgaagactatgggaaacatttacgaactaaaagacttaatcaatttggagtca
aaaagagaacaagatcgtttgattctcaaggatcaaaaagagcgtattattgttggacat
aacgttagttatgaccgttcacgcttaaaagagcagtatttcattgaaggaaccaaggtt
cgatttcttgacactatgtctttgcacatagcaataagtggtattactagttttcaaaga
aatatgcttatcgccgcaaaatctggcacaaatgataagacgctgaaaaatcagcaatat
cgtagcaagtcaggcaagacagaagatattctggaatggcagaatatatgctcatttaac
ggtttaagcgatgtgcataaactttattgcggcggattgggcttagataaagagaagcgg
gacgtcttcgtgactggtacgctgtcagatataacagaagattttcaacagttagctacg
tattgtgcaagggattgccaagccacatacgaagtattgtgtgttctcattcctgagtat
caaaaacgttttcctcatccagtcactttggctggaatgttggaaatgagtacagcctat
ttaccggtaaatcgcaactggcaacgatatttacaagattccgaagatacataccgtgat
ctagagaatgaactaacccagagtttaaaaagagaagctgaccgagcagcccatatgatt
acagataaagcgtataaaggggacccttggctttggaatcttgattggtcgactaaacca
ctgaaagtgaaaaaagccgcaactctcgtgaaaaagaaaaaaaaaacggagaatgttgtt
ccttccataatcgttgacggagaaggagaagatcaattaaatgaagatgaagctggtcta
catgaaattaagagactaaagcagcaatttcaagaattgtttgatactaaaaaccatttg
ttcaaacgtaattccttcttgcccggttatccaaattggtattgcttattatgcgaccgt
gttcaggatggcttggttggtccgtcggaagtttcaacatcagcacaagtagtaccaaag
ctgctcaaattgacatgggacggatacccactgtttcacagccgcgcactgggctggggc
tatctagttccgggaaggcctctcgatttgtctcgccaagatgaaaatgtaatacctttt
cccttgaaggaggcattttctctttcccccccccgaattgcagaacaaaatttatcaact
caaggaattatcacggctgaagaagcacttatgcagctcggtcaaatgacggatctgtca
gctgatcctcttgaattggctgttcattggcaggctatacgacgtggtttaaataataat
atggaacatgagaaagatgtattcccagtaggtgatcaatctcaaaagaagcacagtcat
tatttgacttcagatcggcctgcttggcacctgggaatagggccatatgacgttggtatc
ccgggctgttggttttttcgccttcctcataaatctggcgttgataacaacgttggaaat
ccgttagcgaaagactacttgaataaaattgaagacggaacccttaaagctacatcaagt
tccatcgctgaacatattttaaaactgaatcgcaatatcatctactggagaaatgctcgt
gatcgcattatctctcaaatggtcgtgtggcttcgacagtctcaacttccgcggagcgta
acgaattcggataattttgatccgtcaaataggtatggagccatattaccgcaggtcatt
acctctggtacactcacgagaagggcagttgaatccacgtggttaactgcttcgaacgcg
tataaggatcggttaggatcagagttaaaggctatgatacagtgtcctcccggttttaat
tttgttggtgcagatgttgattctcaagagctttggatagcctcaatcattggagattcg
cattttgctggtcagcacggatcaacggctttcggctggatgaccctacaagggaaaaaa
agtgacgggacagatatgcatagccgaacagctttagccgtcgacattacacgagatcaa
gcaaaagtattaaattacggcaggatatatggcgctggcgaaaggttcgcgaaaaccttg
ttgatgcagtttaaccatcgcttgacagaaaaagaggctgcagaaaaggcccgcaaaatg
tactcgattacaaagggaaattcagtatttaaactaaatagtcgcggacggcaattggct
tttgctctgggacacgcatcagacgaaacagtcacgctagagcaattaaataacataaga
aaaaacgcgaaaaaagataataaatttgcatacttggctagattgccaaccgaagattta
attgatcgtcggatgtggtccggcggaaccgagtcacacatgttcaacaaactggaagaa
atcgctcaatcaaaggcgccagaaacaccggtgttgcattgtcgcattagtcgggccctg
gaaccctgcaacgtcggcaatgaatttatgacgagccgcgtcaactgggtcgtccagagt
tccgccgttgactaccttcatttaatgatagtggcaatgcgataccttcttgacgtgtac
aaaattgagggtcgcttttcgattagcattcatgacgaagtgcgatacatcataaaggaa
gatgataaatttcgtgcagcattggcgctacaaattgcaaatctttggactagatgcatg
ttttcataccaaatgaatctatatgatctgccgcaggctgttgcattcttttcgtctgtg
gatatagacacagtgttgcgcaaagagacaaatatggactgccagacaccttcaaatcct
tacggcctcaaacaaggataccgaatagacttcggctgtagctatgacatttaccaaatt
ttggaaaagactggtggttctcttgatttgaatcgctaa
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