Daphnia magna (water flea): 123473641
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Entry
123473641 CDS
T07514
Name
(RefSeq) DNA damage-binding protein 1-like isoform X1
KO
K10610
DNA damage-binding protein 1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03420
Nucleotide excision repair
dmk04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123473641
09124 Replication and repair
03420 Nucleotide excision repair
123473641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
123473641
03400 DNA repair and recombination proteins [BR:
dmk03400
]
123473641
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
123473641
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
123473641
TCR (transcription coupled repair) factors
Cul4-CSA complex
123473641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
HGTP_anticodon
Motif
Other DBs
NCBI-GeneID:
123473641
NCBI-ProteinID:
XP_045030621
UniProt:
A0A0P6FRV4
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Position
LG6:complement(8625700..8630789)
Genome browser
AA seq
1158 aa
AA seq
DB search
MAHNYVVTAHKQTAVTSCVTGNFTSSNDLNLIVAKNYRLEIYLVTPEGLRPLKEVGIYGK
IAVMKLYKSGNDKKDSLFILTARYNAMILECSGEGENMEIITRTQGNVADKIGKPSETGI
IAIIDPDCRVIGLRLYDGLLKIIPLEKDSSEIKAYNIRIEELCIQDIAFLYGCANPTVVI
IHQDAHGRHVKTREISLRDKEFAKTSWKQDNVETEASMLLPVPEPYGGALIIGQESITYH
NGQNYVTIAPPIIKQSTITCYGKVDPNGSRYLLGDLAGHLFMLVLEKEEKMDGTVTVRDI
KIELLGEVSIPECLTYLDNGVVFIGSRFGDSQLVKLNVTPDENNSYVTVMETFTNLAPIV
DMTIVDLDRQGQGQLVTCSGAYKEGSLRIIRNGIGIHEQASIDLPGIKGIWALKMGFSGN
QSVDDSVVLSFVGQTRVLMLNGEEMEETEIPGLIADQQTFFCGNVGKDSVLQITTGSVRL
ISVNTKQKLSDWTPPDGKMLNVVACNHGQVLCAAGRDLYYLEMEDDTQVILKSHVTLDYE
VACLDLTPISVTSQQNTSIAKAEVCAVGLWTDISARLLKLPTLEEFHKEPLGGEIIPRSI
LMALFEGTPYLLVALGDGSLFYFSMNPVTKLLGDRKKVTLGTQPTVLRPFRSQSTVNVFA
CSDRPTVIYSSNHKLVFSNVNLKEVAHMCPLNSEAYPDSLVLATDTAVTIGTIDEIQKLH
IRTVPLGESPRRIAYQENTQTFGVITSRVDIVESSGLTPARQSASTQAQSVSSSSSLGSA
IKAPVSTRDSCGSGGGAEIGQEIEVYNLLIVDQHSFAVLHAHQFMQNEYALSIVSTRLGD
DVNPYYVVGTALVVPEESEPKQGRIVLFQWSDGKLTTVAEKEVKGACYSLVDFNAKILAA
INNVVRLYEWTAEKELRLECSNFNHIIALYLKRKGDFILVGDLMRSITLLQYKTMEGSFE
EMARDSNPNWMSAVEILDDDTFLGAENSFNLFVCQKDSAATTEEERQQLTEVGRFHLGDM
VNVFRHGSLVMDHAAETLSTPTQGCVLFGTVHGAIGVVTQLPTEFYHFLSEVQTRMARVI
KPVGKIEHSFWRSFATERKVEPCEGFIDGDLIESFLDLSSDKMKEVANGLQMDDGSGMKR
EATVEDIIKLIEDLTRIH
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggctcacaattatgtggttactgcgcataaacaaacagcagtcacttcttgtgttact
ggaaacttcacgtcgtctaatgatctgaaccttattgtggccaaaaattaccgccttgag
atatatttggttaccccagaaggtctcagacctctaaaagaagttggcatctatgggaaa
attgctgttatgaaactttataaatctgggaatgacaaaaaagattccctgtttatttta
actgctcgatataatgccatgattttggaatgttctggggaaggagaaaacatggaaatt
atcacaagaacacaaggaaatgtagcagataaaattggaaaaccatctgaaactggtata
attgcaatcatagatcctgattgtagggtgattggccttcgtctttatgatggcttgtta
aaaatcattcccttggaaaaagatagcagtgaaattaaagcctacaatattaggattgag
gaactttgcatacaagacatagctttcttatatgggtgtgcaaatccaactgtggttatt
attcaccaggacgctcatggtagacacgtcaagacacgagagatatctttgcgagacaag
gagtttgccaagacctcctggaagcaagataacgtcgaaaccgaagcctcaatgttgttg
ccagttcctgaaccttacggaggggctttgattattggtcaggaatcaataacctatcat
aacggacaaaattacgttaccatcgcaccaccaattattaaacagagtaccatcacctgc
tatggtaaagttgatcctaatggatcacgatacttattgggagatttagccgggcatctc
ttcatgctggtattggaaaaagaggagaagatggatggaacggttacagtacgtgacatt
aaaattgaacttcttggagaagtttcaattcccgaatgtttaacctatcttgacaatggg
gttgttttcatcggttcccggtttggagattctcagttagtcaaattaaacgtcactccc
gatgaaaacaattcctatgttacggtgatggaaacattcaccaatctggcgcctatcgta
gatatgacaatcgtcgatcttgatcgacagggacaaggccaacttgtaacgtgctcaggt
gcttacaaggaaggttcattgcgtattatacgcaatggaattgggattcacgagcaagca
agtatcgatttgcctggtattaagggaatatgggccctgaaaatgggtttttctggaaac
caatcagtagatgacagcgtcgtcttatcttttgtgggacaaacaagggttttgatgtta
aatggagaagagatggaagaaaccgagattcctggtctcattgctgatcaacaaacgttc
ttctgcggcaatgttggaaaagattccgtattgcaaatcacaaccggtagcgtgagacta
atatctgtgaacacgaaacagaagctaagtgattggacacctcccgacggaaaaatgctc
aatgtcgtagcttgtaatcatgggcaggtgctatgtgctgccggtcgtgatctttactat
ttggaaatggaagatgacactcaagtcattcttaaaagtcacgtaactctggactacgaa
gtggcttgtttagacttaactcccatttcggtaacttctcagcaaaacacttctatcgca
aaagctgaggtgtgtgctgtcggtctgtggacagacatttctgcgagacttctaaagctg
cctacattagaagagtttcacaaagagccacttggaggagagattattccgcgatctatt
ttgatggctctatttgagggtacaccctatctgcttgttgcactgggtgacggctccctt
ttttacttcagtatgaatccagtcaccaagttacttggtgaccgtaaaaaggtaaccttg
ggaactcagccgaccgtccttcggccgtttcggtctcaatccaccgtcaatgtttttgca
tgctcagaccgacctacggttatctattcttccaatcataaattggttttcagtaacgtc
aaccttaaagaggttgcacatatgtgcccgcttaattcggaagcgtatccagatagctta
gtgctggcgacagacactgcggttaccataggaacgatcgatgaaatccaaaaattacac
attaggacggtaccgcttggtgaatcccctcgtcgaatagcataccaggaaaatacacag
actttcggagtgattacgtctcgggtcgacattgttgaatcctctggtttgacgcctgcc
cgtcagtctgcttctactcaggcacaatctgtatcctcatccagctcacttggttcggcg
atcaaagcacctgtcagtacgagggactcttgtggaagtggtggtggagccgaaattggt
caggagattgaagtatacaatttgctgattgtcgatcaacactccttcgcggtccttcac
gcgcatcagttcatgcagaatgaatatgctctgagcattgtgtctacgcgattaggagat
gatgtcaacccgtattacgtggtcggaacagcattggtggtacctgaagagtctgagccc
aaacaaggtcgcattgtcctatttcagtggtccgacgggaagttgactactgttgcagaa
aaagaggtgaagggcgcgtgctattcattagtagatttcaacgcaaaaatactggctgcc
atcaacaatgtcgttcggctatatgagtggacggcagagaaagaattgagattagagtgc
agcaatttcaatcacattatagccctatatctcaaacggaagggtgacttcatcttggtc
ggtgatctaatgaggtccattactctattgcaatataaaactatggaaggaagctttgag
gagatggcaagagatagtaatccgaattggatgtcagctgtcgaaattttggatgatgac
acgttccttggcgccgagaattcttttaacctttttgtttgtcagaaagacagtgcggcc
acaacagaggaagagaggcaacaacttactgaggttggtcgctttcatctcggcgacatg
gttaatgttttccgacacggatctttggttatggaccatgctgctgaaacgctaagtact
cctacgcaaggctgcgtcttatttggaacagtccatggagctataggcgtggttacgcaa
ttaccaaccgaattttatcacttcctgtctgaggtacaaactcgcatggcccgtgtcatt
aaacccgtggggaaaattgaacatagcttctggagaagtttcgccaccgagcgcaaagtt
gaaccgtgcgagggctttattgatggggatttaattgaatcttttttagatttatcaagt
gacaagatgaaggaagttgctaatggattacagatggacgacggaagtggaatgaaaagg
gaagcgacagtagaagatataattaaactgatagaggatttaactcgaattcattaa
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