Daphnia magna (water flea): 123475438
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Entry
123475438 CDS
T07514
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123475438
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dmk01002
]
123475438
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
123475438
03036 Chromosome and associated proteins [BR:
dmk03036
]
123475438
03400 DNA repair and recombination proteins [BR:
dmk03400
]
123475438
Peptidases and inhibitors [BR:
dmk01002
]
Metallo peptidases
Family M67
123475438
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
123475438
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
123475438
BRISC complex
123475438
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
123475438
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
123475438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
BRCC36_C
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
123475438
NCBI-ProteinID:
XP_045034015
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All DBs
Position
LG8:complement(10709230..10710821)
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AA seq
289 aa
AA seq
DB search
MPIKEVFVETDVYLTCLSHALSTEKEEVMGLLLGHVDQRLDLSVQAGGSYGQSFIENVII
LQRSVRQADRVEISPLQLSAAAQEAEKLSIELGKPIRVLGWYHSHPHITVQPSHVDMQTQ
SNYQAMDPDFVGLILSVFQQENNEKFANSSLICFQAVNIDGVLRSREIVLSISPPESAAG
REIKTLAKIPLILLSEEREHVDKCSSSDLVSKVQNKAGMYAVQQLSCYKGIQLISSISNI
IVFTQAICQLLQCCEMPCVSAVLAYEQSLLNNLYRLQLVKQSFDNLTKC
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgccaattaaagaagtttttgtagaaacagatgtgtaccttacttgtttaagtcatgcc
ctatccacagagaaagaagaggttatgggactgctgttaggtcacgtagatcaacgtctc
gatttatcagttcaagcgggtggttcgtatggacaatcatttattgaaaatgtaatcatt
cttcaaagaagtgtccgtcaagctgatcgagttgaaatatctcccttgcaattgtctgca
gctgctcaagaagctgaaaaactatcaattgagcttggtaaaccaattagggtacttgga
tggtaccactcacatccacatattactgttcagccatcacatgttgatatgcaaacacag
tccaattaccaagccatggatcctgactttgtaggattaatattatcagtttttcaacaa
gaaaataatgaaaagtttgccaattcttcactgatttgcttccaagcagtaaatattgac
ggtgttttgagaagtcgagaaattgtgctgagtatttctcccccggaatctgccgcaggg
cgtgaaatcaaaacattagcaaaaattccattaattttgttaagtgaagagagagaacat
gtggataaatgctcctctagtgacttggtttctaaagtacagaacaaagcaggtatgtat
gcagttcagcagcttagttgttataaaggtattcaattaatttcatcaatttcaaatatt
atagtatttacgcaagcaatttgtcaactacttcaatgttgcgaaatgccctgcgtcagt
gcagttctcgcttatgaacaatctttgttaaacaatttatatcgtttacagttagtaaag
caaagttttgataatctaactaaatgttag
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