Daphnia magna (water flea): 123476007
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Entry
123476007 CDS
T07514
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
123476007
03036 Chromosome and associated proteins [BR:
dmk03036
]
123476007
Transcription factors [BR:
dmk03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123476007
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123476007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-met
zf-H2C2_5
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2H2_15
Ldl_recept_b
zf-C2H2_7th_ZNF462
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
123476007
NCBI-ProteinID:
XP_045035267
LinkDB
All DBs
Position
LG9:7200091..7203602
Genome browser
AA seq
696 aa
AA seq
DB search
MAALKQEEESISEIQNYLDTFNKEIEDPNQIPGSQLASKEAVVPNDVEANDTPEDGGTYF
VDQSGQYYYQSNDIDGGDGTATLVAQDGGTMVSIPNNGTSGDEGVVLAQGEGGYQTVTIL
PPESSSGEVSYVLIVQQPDGGEQAVISSEVLDGTEGEVIQEDEEGEDDENFDGDEDKDED
QNLAVYDFDEGEEGGSGDGQDSEDEDIKPRMTKGGAKKVTQTVSQAHMCNYCNYTSPKRY
LLSRHMKCHSEERPHKCSVCDRGFKTLASLQNHVNTHTGTKPHRCKHCHSSFTTSGELVR
HVRYRHTHEKPHRCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLR
IHTGEKPYECDICHARFTQSNSLKAHKLIHTGNKPIFQCELCPTTCGRKTDLRIHVQKLH
TSEKPLKCKRCGKSFPDRYTFKLHSKTHEGEKCFKCDLCAYASISQRHLESHMLIHTDQK
PYQCDQCDQCFRQKQLLRRHQNLYHNPDYVPPPPGEKRHECPECGKPFRHKGNLIRHLAL
HDPDAAQQELRAFRAARKQRIKDGQSLEGLTEGEETDMEDEDISLGLNSNEELVSVQGQD
GQQYVVLEVIQLEGEGGDEDEATMMEVEGATEMDGSLIEGEGNTMTSLDDEIEDSMQATP
RVRRSSQVAKAQDTSKDVANCFGFDDDDEEDEDDDK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttgaagcaagaagaagaatctataagtgagatacaaaattatctcgatact
ttcaacaaggaaattgaagatccaaaccagataccaggttcccaactagcaagcaaagaa
gcagttgttccaaatgatgtagaagctaatgatacacctgaagatggtggcacctatttt
gtggaccagagtggacagtactactatcaaagcaatgacattgatggaggagatggtaca
gctactcttgttgcccaagatggaggtaccatggtgtctattcctaacaatggaacttca
ggagatgaaggagttgtgcttgcgcaaggtgaaggtggctaccaaacggttaccatcctc
cccccagaatcatcttcaggtgaggttagctatgttttgattgtacagcaaccggatgga
ggtgagcaagctgtgatttcatctgaggttcttgatggtactgaaggtgaagttatacaa
gaggatgaagaaggtgaagatgatgagaattttgatggagatgaagataaagatgaggac
caaaatctagctgtatatgacttcgacgaaggtgaagaaggtggtagtggcgatggtcag
gattccgaggatgaagatatcaaaccaagaatgaccaaaggtggtgcgaagaaagttaca
cagaccgtctcacaagcgcatatgtgtaattattgtaattacaccagccctaagcgatat
ctgttgtctcggcacatgaaatgtcattccgaggagcgtccgcacaagtgcagtgtatgt
gaccgaggattcaagaccttggcttcacttcaaaaccatgttaacactcatacgggcaca
aagccacatcgatgcaaacattgccatagttcgttcacaacttcgggagagctcgttcgc
cacgtacgctaccgtcacacacacgagaaaccacatcgttgcaccgagtgcgactacgct
tccgtcgagttaagcaagctcaaacgtcatatgaggtgccacactggtgagcggccgtac
cagtgtccccactgtacgtatgccagcccagacacattcaagttgaagcgacatttgcgc
atacatactggtgaaaaaccttacgaatgcgatatttgccatgcacgattcacgcaatcc
aacagtctcaaggctcataaactcatccacacagggaataaaccgattttccagtgtgaa
ctgtgtccaaccacttgtggccgaaagactgatctgcgaattcacgttcaaaaattgcac
acgtcagagaagcccttaaaatgcaaaagatgtggcaaatctttccccgatcgctatact
ttcaagttgcacagcaaaactcacgaaggggaaaaatgctttaagtgcgacctttgtgct
tacgcatcgatctcgcaacgccacttggaatcacacatgctgattcacaccgaccagaaa
ccttatcagtgcgatcagtgcgatcagtgcttccggcaaaagcagttattacgccgtcac
caaaacttgtaccacaatcccgattacgtgcctcctccgcctggagagaaacggcacgaa
tgtccggaatgtggaaaacccttccgccataaaggcaatcttattcgtcatttggctctt
catgatccagatgccgctcagcaagagttgcgagccttccgtgctgctcgcaaacagcgt
attaaggatggccagagtttagaagggcttacggaaggggaagagacagatatggaggat
gaagacataagccttggtctcaactccaatgaagaattggtctctgttcaaggtcaagat
gggcagcaatacgttgtccttgaagttatccagttagagggtgaaggcggagacgaagac
gaagccaccatgatggaagtagagggggctacagaaatggacggttccttgatagaagga
gaaggcaataccatgacctctttggatgatgaaatagaggattccatgcaagccactcct
cgggtacgtcgtagttctcaggttgctaaagctcaggataccagtaaggacgtggcgaac
tgtttcggattcgatgatgacgatgaagaagacgaggacgatgacaagtga
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