Daphnia magna (water flea): 123477048
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Entry
123477048 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 12-like
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmk03021
]
123477048
Transcription machinery [BR:
dmk03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
123477048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12
THDPS_N_2
Motif
Other DBs
NCBI-GeneID:
123477048
NCBI-ProteinID:
XP_045036209
LinkDB
All DBs
Position
LG10:3834014..3843542
Genome browser
AA seq
2276 aa
AA seq
DB search
MACLSMENRPLKKLRLGPPDVYPQDPKQKEDELTPVNVKQGFSHTPNLNQSEEYGSAKNH
NFSVSKVQTFINGVLTKKQEINMLPDTGRKRQLINPKENFHNVTPKSKMFIESWFKDLAG
SKPLINLGKRVPIFNKKEEIFIQLSEYQVPMSRAIWLIKMTSAYSMAISEAKMKKRQVPD
SSQEWTSTLVRFLKEQIVKLQDFYQKSIIVGGAQAVFASNATAYHNGSPLMTDEQKLALR
QFNYCQQLCKVMFEEGLLECQDFLQWQLDMLEKCKTCDDGLLKFVVPMILQYVEEFTQCE
ILSRKLVFQVCRRISPLLSNDQSNEGSVSLDVGNCGQHRSVLIQMSAIIQAVVLHCPTAL
VWNHAGEGKMSSHLVGSPLDQLPLPPSALPMAPRFSNDHVREMLRDSENIIKQRSKAAEA
RWPLDKLIRNLEPNCSTKKQQYQPQTGMVTARVLHALEALDLHSFDRVDSTHSIDSLYSK
LFPAIGGNKGSLDHATAEQVDQFAKQDEPYVRLLCQWAVSDQRCGEHRAIAAALLLEKRQ
SDLVTLTETDGAGADDNDTDESSSAISALLPIYQGFLMKFLDSEAPVLNEPVPGHNNRTV
FASLVHLFHELIKHDVFSHDMYMCTLISRGDLLSVTPCHNGTTVTPSTTGHFAGTPSSGM
SSLTGFQSMNDLRCEMDDSKIDDDLGKLLQHIKEEQQIVMDTPDSPKDENHSTLEPGRGE
KEGKRQSRHLLFTTHFPXPQDDSLTHDCNQRHILLYGVGKAREESRHAVKKVSKEMSRLF
HKKLAIDVQTEGTNLAGGAXAFVGSTKSRKHSSRLEFNFELSMQRFLALSYFDRHAVAAQ
AASTCMEMINSFIVGGAAYLPVLEHISFLFDLFEVSLSISGLIDLCLQLLKELPEVELLL
SQRNSVLSRSYLTNVGLYVVGVLRRFHCCLLLSPESTASAFESLCRIVKHVTNPADCSSA
ERCILAYLYDLYSCCSFLKAKNGQLDSSLANSNSSSSRSSGGVALNTGSEVFAFSNAYPK
IKQTIFAPVVSLPKSLHPLNRDFLQDYITSPRRKPEPHILRQLSDSAQLRYSFVCNVVVA
VCNEVDNDKLNDIALLCAELTAGCSALSAEWLGVLTTLCYSASTYMDVLTQVDVQDNSIH
HNLAVLFSVLLARHCFGLQDFLLYVGVPSLVKIWNEGGRSDTDPEAEAGARLTCHLVLRL
FKTSDAPHPACYSSSSHSVNASPHHTLQQTATSSALGVKLACDRHLLAATHNSISVGPVL
AVLKAILVLADRVPPEGKGSRVTGSSGGMNSNSNRLGGGGNAMANEVSISHILGTSWSGD
LDLDIGSANFGVGGGRNSFGVATENVPLASYARYVLRQICSQPWVHQRCLQNPEELLKLD
GLLDSCLSLRQAQRLLQMISRPDSGATAADEHTNNEHQDYRQVVNRVLESLDQWRLRVAW
LDLQLLCQQLTTVGSGGTSSADMNQLLEAIARAVLDVFELSTTSSIKEDPDQGGSSTKTQ
PNLSISLIAPLVSKLPGSVQGRILKVASQVLEICNWGPPSKGKDKERNIPNTTSAFRSKS
LLSNEPLLSLVMTCLKGQDEQREAFLSSLHSQLSHFIFLPKEDRLYHGEDVKARQAMLEA
LQLRFSLVGGLFDSILRNPTVVIDWAILLTQLVTAGVVDLSNNTELFATLQDMLATLLHS
TLVTDGQSERGEDSRKYYPLLIKKLKKELAERKSSPSIQCIKQLLPLPKLASEFVTCEPY
GTLTDIKGNKISGFDSNDKKQGHRLHEKQRVSPWEILEGHKTVAPLSWAWFGAVRVERKP
LRHQEVQRLLRHHTHALQKPASYYLEHPLLPPEDLEPPVIEKTIPKEEICFKTEPMSDQS
PRGGTKRGQKTNQRRPRGRRGAAAAAAAAAAATVAGAPPAVGGYQSPVASGMYPPSQPPP
QWNAYTSPAPPASQQGTVPTSAAFFPQQSIGPRFPTERPGTQSRQALSNMLRQRHPGTQF
VPASAXNPSGTNPVAVPNAPPTAGGGGGTMANNSRIAGGVGAGGASQPQFAGISMVDKQR
QQQFIRQQIRQQHTGGNVFGQQGPQQTQPQQQQPQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQVQMAPVGFANIHTPMNQNMNQNMNQNFNMFQSGAPGMQQLVNPQQQAQPQPTQQQQ
PQQQAMIGQHFNQAGGNFPMQQTQPQGNMILMQQQHQQPQGRGMNAPAMRPPFMQSGGMQ
INSAQPNQFVRGAMPNTSQQQAVRLQHQQIVAIQQQQQMQHNMGQQQHNQHYHQPF
NT seq
6831 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtttatcaatggagaatcgtcctcttaagaaattgcgattaggaccgcctgat
gtttacccacaggatcccaaacaaaaagaggatgagttgacgcccgtcaatgtgaaacaa
ggtttttctcatacaccaaatctgaatcaatctgaggaatatggctctgccaaaaatcat
aacttttctgtgtccaaagttcagacattcattaatggtgtacttacaaagaaacaggag
attaatatgttgcctgacactggccgaaaacgtcagctaataaaccctaaagaaaatttt
cataatgttacaccaaagtcaaagatgttcattgaatcatggtttaaagacttagcaggc
agcaagcctttgattaacctaggcaaaagagtgccaatattcaacaagaaagaggaaatt
tttatccaactcagtgaatatcaggttcctatgtctagagctatttggttaataaagatg
acatctgcctattctatggcaatttctgaggctaaaatgaagaaacgtcaagtaccagat
tcttcacaagaatggaccagtactttagtccggtttttaaaagaacaaattgtgaaacta
caagatttctatcaaaaatcaataattgttggaggggctcaggctgtgtttgcttccaat
gctacagcgtatcataatggaagtcctctgatgaccgatgaacagaaacttgcacttcga
cagtttaattattgccagcagttgtgcaaagtcatgtttgaggaaggtctccttgaatgc
caggatttcttacagtggcaactggatatgttggaaaaatgcaaaacatgtgatgacggt
cttctcaagtttgttgttccgatgatattacagtatgttgaggaattcacgcagtgtgaa
attctgagtcggaaacttgtttttcaggtgtgtagaagaatatcacccctcctgtcgaac
gatcaaagcaatgagggatcagtttcattggacgtaggcaattgtggccagcacaggagc
gttcttatccagatgtcggcaattattcaagcagtcgttctacattgtccgacggcgtta
gtgtggaatcatgccggggaaggaaagatgtcatctcatttggttggatctcctctggat
cagttgccgcttccgccttcagcgttgccaatggctccacgtttttcgaacgatcatgtc
cgcgaaatgttgcgagattccgaaaatattataaaacaacgtagtaaagcggctgaggca
cgttggcctttagataaactgattcgtaatcttgagccaaactgcagtactaaaaaacaa
cagtatcagccgcagactggtatggtcacagcacgcgtgcttcatgctctggaagcattg
gatcttcacagttttgaccgtgtcgactcaactcacagtatcgattcactgtactccaaa
ctatttcctgcaattggtggaaacaaaggaagccttgatcatgcaactgctgaacaagtt
gatcagttcgccaagcaggatgagccttatgttcgcttactgtgccaatgggcagttagt
gatcaacgctgtggagaacatagagcgattgcagctgctttgctgttagaaaagaggcaa
tcagatttggtgactttaacagaaactgatggagctggagcggacgacaatgatacggac
gaaagctcttccgcaatttcggctttgctaccgatttatcagggttttttgatgaaattt
ctcgactcagaagccccggtgctaaatgaaccagtcccagggcataacaatcggacagtt
tttgcttctttggttcatctgttccatgaacttatcaagcatgacgtgttctctcatgac
atgtatatgtgtaccctaatttcgcggggcgaccttctgtcagttacaccgtgccacaat
ggaaccacagtaaccccgtcaacaactggtcatttcgccggcaccccaagcagtggaatg
agcagcttaacgggattccagagcatgaatgatttacgttgcgaaatggacgacagtaaa
attgatgacgacctaggaaagctattgcagcatatcaaagaggaacaacagatcgttatg
gacacccccgactctcccaaagatgaaaatcatagcacacttgaacctggtcgtggtgaa
aaggagggtaaacgccagtcgaggcacctcttgttcacgacccacttccctntacctcag
gatgacagtttaacccacgactgtaaccagcgacatattttgttgtatggagtaggaaaa
gcacgcgaggaatctcgtcatgccgtcaaaaaggtctccaaggaaatgagtcgtcttttc
cataaaaagcttgccatcgacgtccaaacagaagggactaatttagcgggaggtgcgnna
gcatttgttggttctaccaaatcacggaaacattcatctcgtctcgagtttaatttcgag
ctcagcatgcaacgctttttggccctttcttactttgatcgtcatgccgtagctgcccag
gcagcctcgacttgtatggaaatgatcaatagctttattgttggaggagcagcttatctg
ccagtcttggagcatatatccttcctgttcgatctctttgaagtttcgctgagcatcagt
ggcctcatagacttgtgtcttcaacttctcaaagaacttcctgaagtggagctgctgttg
tctcaaagaaattctgtcctcagtcgtagctacctgactaatgtaggcctttacgttgtt
ggagttcttcgtcgtttccactgctgcctactcctatcacctgaatcaactgcgagtgcg
tttgaatcactttgccgtattgtgaagcatgttacgaatccagccgattgcagttcagct
gaacgctgtatcctagcgtatttgtacgacttgtatagttgctgctcctttcttaaggct
aaaaatggtcagttggattcatcgcttgccaattcaaattcatcttctagtcgcagtagt
ggtggcgtggctctgaatactggcagcgaagtgttcgcattctcaaatgcttacccgaaa
atcaaacaaaccattttcgcccctgtcgtgtcgctgccaaaatcccttcatccgctaaac
cgggattttctccaggactacataaccagcccacgccgcaagcccgagccccatatctta
cgtcaattatcagattctgcacagttgcgttacagcttcgtctgcaacgtcgtcgtagcc
gtatgcaatgaagttgacaatgacaaactcaatgacattgctctcctttgtgctgaattg
actgccggatgctctgcgctctctgccgaatggctaggagtgttgacaacgctctgctac
tcggcgtctacctatatggatgtcctgacgcaggtcgatgttcaggataactcaatccac
cataatctagccgtgttattttcagtgctcctggcacggcactgcttcggccttcaggat
tttttgctctatgttggagttccttccctagttaaaatatggaacgaaggaggccgctct
gataccgatccggaagctgaagctggcgcacgtttgacttgtcatctcgtgttgaggctg
ttcaagacatcggatgctccacaccctgcatgttatagcagtagcagccacagcgtgaat
gcatcacctcatcacacactgcaacaaaccgccacctcctctgcgttgggtgtcaaactg
gcgtgcgatcggcatctattggcggctacgcataatagtatatcagttggccccgtctta
gcagtactaaaagctatccttgtgctggcagatcgcgtgccaccggaaggtaaaggcagt
cgcgtgaccggcagcagcggtggcatgaacagcaatagcaacagattaggtggaggtggc
aacgccatggccaacgaagtcagcatttcccacatattgggtacgtcttggagcggcgac
ctagacttggacattggttcggcaaattttggagtcggtggtggccgcaatagttttgga
gttgctacagagaacgtgcctttggcttcctacgccagatatgttctcaggcagatttgc
tcacagccttgggttcatcagcgttgtcttcaaaaccccgaagaattgttgaagctcgat
ggtctgctagatagctgtttgagcttgcgtcaagctcagcgtctccttcagatgataagt
cgacctgattcaggagccaccgctgccgacgaacacaccaacaatgaacatcaagattat
cgtcaggtggttaatcgtgttttggagagcctcgatcaatggcggctgcgagttgcttgg
ttggatctgcaactgttatgccagcagttgacgacggtaggcagtggcgggacatcgtcc
gccgacatgaatcaattactagaagcgatagctcgcgccgtgcttgacgtattcgagtta
tccacaacatcaagcattaaagaggaccccgatcaaggcggaagttcgaccaaaacgcaa
ccgaatctgtccatttccttaattgcacctttagtttcgaagctaccaggctccgttcaa
gggcggattctcaaagtggcaagtcaggtgctcgaaatttgcaattggggcccgccttcc
aagggaaaagataaagagcgcaatattccaaacaccacgtctgcattccgttccaaatcg
ctgctgtcgaacgaacctcttctttcccttgtgatgacatgcctcaaaggacaagacgaa
caacgcgaggcttttctttcttcacttcattctcagttgtcgcacttcattttcttgcct
aaagaagatcgtttgtatcatggtgaagacgtcaaagcccgccaggccatgttagaagca
ttgcaattgcggtttagtcttgttggcggtttgtttgattccattttacgtaatcctacg
gtagtcatagactgggcaatcctgttaactcaactagtgacagctggagtagtggatttg
tcgaataatacggaactatttgcaacattgcaagatatgctagctacattgcttcattca
acgctggtcactgatggccaatcggaacgcggcgaagatagtcgcaagtattacccgctc
ctgattaagaagctgaaaaaagaattagccgaacgcaaaagttctccatccatccaatgt
atcaagcagcttcttcctttgcccaagctagccagcgaattcgtcacgtgcgaaccgtat
ggaactctgactgatatcaagggtaacaaaatcagtggctttgatagtaatgacaaaaag
caaggacatcggctccatgaaaagcaacgggtgtctccttgggaaatattggaagggcac
aaaacagttgccccactgtcttgggcttggtttggcgccgttcgtgtggagaggaaacct
ctccgccaccaagaagtacagcggctcttacgtcatcacacacatgctctacagaaacca
gcttcttactatctggagcatcctctccttccaccggaagatttagaacctccagtaata
gagaagaccattccaaaagaagaaatttgcttcaaaacggagccgatgtccgaccaatca
ccgaggggaggaactaagcgtggccagaaaacgaatcagcgtcgaccgcgaggcagaaga
ggtgcggcagcagcagctgccgccgctgcagctgcaacggtagcgggagcaccgccggct
gtcggtggttatcagagcccagtggcatctggaatgtatccaccttcgcagccaccacca
cagtggaacgcttatacttcgccagctccacctgcttctcaacaaggaacagtgcccaca
tctgctgctttctttccccaacaatcaattggccccagatttccaaccgaaagaccggga
acccagtcacgtcaggcattgagcaatatgctgaggcagaggcatcctggtacacagttt
gtgccagcttctgctntcaatccttctggtacgaatccggttgcagtaccaaatgcccca
cccacggcaggaggaggaggaggaactatggctaacaattcccgaattgcgggaggtgta
ggagctggaggtgccagtcaaccacaatttgctggcatttcgatggtagataaacagagg
cagcagcaatttatccgccagcaaatacggcagcaacatactggcggtaatgtttttggc
caacaaggtcctcagcaaacacagccccaacagcagcaaccccaacaacaacaacaacag
cagcagcaacaacaacaacaacaacaacaacaacaacaacaacagcaacagcagcagcag
cagcagcaacaagtgcaaatggctcctgtcggctttgctaatatacacacgccaatgaac
cagaatatgaaccagaatatgaaccagaatttcaatatgtttcaaagtggggcccctggt
atgcaacagctcgtcaacccacaacagcaagcacagccgcaaccaacacagcagcagcag
cctcagcagcaggcaatgattgggcagcatttcaatcaagcaggtggaaattttcccatg
caacaaacgcaacctcaaggaaatatgattctcatgcaacagcaacatcaacagccccag
gggcgtggaatgaatgccccagctatgcgccctccgtttatgcaaagtggaggtatgcag
ataaattcggcacaaccaaatcaattcgtacgaggagctatgccgaatacttcccagcag
caagcagttcgattacaacatcaacaaatagtggctatacaacagcaacaacaaatgcag
cacaacatgggacagcagcaacataaccagcactatcatcaacctttttaa
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integrated database retrieval system
