Daphnia magna (water flea): 123477485
Help
Entry
123477485 CDS
T07514
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
123477485
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dmk04812
]
123477485
Enzymes [BR:
dmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
123477485
Membrane trafficking [BR:
dmk04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
123477485
Cytoskeleton proteins [BR:
dmk04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
123477485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
AAA_lid_3
RuvB_N
AAA_22
AAA_5
AAA_16
TIP49
IstB_IS21
nSTAND3
Mg_chelatase
AAA_2
RNA_helicase
AAA_33
AAA_14
AAA_28
AAA_24
Motif
Other DBs
NCBI-GeneID:
123477485
NCBI-ProteinID:
XP_045036787
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MWNLTGKGSSSDIFNRQQQCHIKAYGLVSRALKLDEQNLKDRSLVIDLYTEGIKELESGI
SIQIEGIGESYEKAKSCINLHSRILKLLIPIMQLQEKMRTTLQMARDRLIILKGVSDLHN
LPLADQEEELESVEYMPNHRSTTEIKQQIFDQSKDLASVPHPPGATCSRSGTVRKQAMTP
VRRINAAKPNVVSASQSANKNSPITKGGGVKCHTAITTIAKTTPPTRLPTVASNRRPALL
PTPPRAPASVLTKRTSKVSTVKGVDSKLVSLILDEIVDGGADVSFGDIAGLQQAKQALQE
IVILPSLRPELFTGLRSPARGLLLFGPPGNGKTLLARALATESSATFFNISASSLTSKYV
GEGEKLVRALFGVARELQPSIIFVDEIDSLLSERREGEHEASRRLKTEFLCQFDGLRASH
EEKILVMGATNRPQELDEAVLRRFPKRIYISLPDVSARALLLTKLLSKHNNPLCEKQLAK
LAQLTDSYSSSDLTALAKDAALGPIRELGPEKVKFMKTQQLRPISMQDFLDSLKRVRHSV
SESSLNVYAKWNREYGDVSM
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtggaatttgactggtaaagggtcttctagtgatatttttaatagacaacaacagtgt
catataaaagcatatggacttgtttcgcgtgctctgaaacttgatgaacaaaacctgaaa
gacaggtccctagtcattgatttgtatactgaaggaatcaaggaattggaatctggaata
agcattcaaatagaaggaattggtgaatcctatgaaaaggctaagagttgcattaacttg
catagtcgcattctaaagttgctaattcctataatgcagttacaagaaaaaatgagaacc
accctgcaaatggcaagagatcgcctaattattttgaaaggtgtaagcgatttacataat
ctgcctctcgctgaccaggaggaagaattagaatctgtagaatatatgcccaaccataga
agtacaactgaaataaaacagcaaatttttgaccaatctaaggacttggcaagtgttcca
cacccacctggtgctacatgtagtcgctctgggacggttcgaaagcaagccatgacacct
gtgcgcagaattaatgctgcaaagccaaacgtcgtttctgcatctcaatcagctaataaa
aacagtccaataactaaaggaggaggtgtgaaatgtcataccgctattactactatcgcc
aaaacaacgcctccgactagactgcctactgttgcaagcaatcgccgccctgcacttttg
cctacgccgcctagagccccggcctccgttttaaccaagcggacttcaaaagtttccaca
gtaaaaggcgtcgactcaaaactggtatctttaatcttagacgaaattgtggatggtggt
gcggatgtttcttttggtgatattgccggtttgcagcaagccaagcaagcattacaagaa
attgttattcttccgtccttaaggcctgagctctttacaggtcttcggtcccctgcccgt
ggtctcctgctttttggccctccaggtaatgggaaaactctgcttgctcgtgctctcgca
acggagtcgtcagccacgttttttaatatttccgcttcatctttaacttcaaaatacgtc
ggtgaaggggaaaaactggtgcgggctctttttggggttgccagagaattgcagccttca
ataatctttgtcgacgagatagattctctgctatccgaacgtagagagggagaacatgaa
gcgagccgaagattaaaaacagaattcctttgtcagtttgatggacttcgcgcttcacac
gaagaaaaaatcctggtaatgggagctacaaatcgaccacaggaattagatgaagccgtt
ctaaggcgttttccaaagagaatatatatcagtttgccggacgtttctgcaagggcccta
ctacttacgaaacttctttcgaagcataacaatccactgtgtgaaaaacagcttgctaaa
ctcgctcagctgactgatagctattctagttcggatttgacagccctggccaaagacgct
gctcttggacctataagagaacttggaccagaaaaagttaagttcatgaagacacaacag
cttcgtccgattagcatgcaagatttcctagattctctaaaaagagttcgtcatagtgta
tcggaatcttcactaaacgtctatgcaaaatggaatcgtgaatacggagacgtaagcatg
taa
DBGET
integrated database retrieval system