Desulfococcus multivorans: Dmul_08260
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Entry
Dmul_08260 CDS
T04568
Symbol
deaD
Name
(GenBank) DeaD: cold-shock DEAD box protein (ATP-dependent RNA helicase)
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dml
Desulfococcus multivorans
Pathway
dml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dmul_08260 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dml03019
]
Dmul_08260 (deaD)
03009 Ribosome biogenesis [BR:
dml03009
]
Dmul_08260 (deaD)
Enzymes [BR:
dml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Dmul_08260 (deaD)
Messenger RNA biogenesis [BR:
dml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dmul_08260 (deaD)
Ribosome biogenesis [BR:
dml03009
]
Prokaryotic type
rRNA helicases
Dmul_08260 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOY57601
LinkDB
All DBs
Position
complement(920656..922302)
Genome browser
AA seq
548 aa
AA seq
DB search
MNFSELGLNAALLEAVADMGFTMPTAIQQRAIPALLSGEKDFVGLAETGTGKTGAFGLPL
IQRIHPADTRPQGIVICPTRELCLQITEDLKHYARHLREIRIIAVYGGAAVSNQIRLLRK
GPQIIVATPGRLMDLLDRKALSLSHVSCAVLDEADEMLNMGFKEDIDRILKQMPGDRNIW
LFSATMADGVAAIARTYLTNPTEVRVGGRKQSPKGLRHTCYVIHERHRYEGLKRIIDFNP
DIFALVFCRTRMETQAVADALIQDGHPADTLHGDLSQTQRDGVMRKFRQGAVRILVATDV
AARGLDVEEISHIIHYRLPDEMEIYTHRSGRTARAGKAGESIALVNTREIRRIRELEARR
NIRFTFSKMPDGRAICEKRLLGLIGKIVRTEVDKTDIDAHLPAILTALAPFDKEELIKRF
LFAEFDRFNAYYRTAEDIHVNVKGLGAGKTAGSKTPAPKNRTTLRKTRRFFINIGRLDKI
NAKAVARLIASKTGIGINMIGAVDLKREFSFFEVERSAAKKIRDAFENVVLDGRRIQVRD
AVREPKAS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaattttagcgaattagggctgaatgcggcacttctcgaagccgtcgccgatatgggg
tttacaatgcctacggcgatacaacaacgcgcgatacccgcactcctgtcaggagaaaag
gactttgtggggctggctgaaacgggtaccggtaaaaccggtgccttcggactgccgctg
attcaacgaatccatcccgccgatacccgaccccaaggcattgtgatctgtccgacaaga
gaactgtgtctgcagattacggaagatctgaaacattatgcacggcatctgagggaaatc
cgtatcatcgccgtttacggcggagccgccgtctccaaccagattcggctgctcagaaaa
ggcccccagatcatcgtagcgacaccggggcgactcatggatctcctcgaccgcaaagcc
ttgtccctgtcccacgtctcctgcgcggttctcgatgaagccgatgaaatgctcaacatg
ggcttcaaagaggatatcgaccgtatcctcaagcagatgcccggggatcgaaatatctgg
ctcttttccgctaccatggcagacggcgtcgccgccatcgcacgaacatacctgaccaat
ccgacggaggtgcgggtcggcggccggaaacagagcccgaagggccttcgccatacctgt
tatgtcatccatgaacggcaccggtatgagggcctcaagcgaatcatcgacttcaacccg
gacatcttcgccctcgtcttctgtcggacccgaatggagacccaggccgtagccgatgca
ctcatacaggacggacatccggccgacacgcttcacggcgatttgtcccaaacccagcgc
gacggcgtcatgagaaaatttcggcagggtgcggttcggattcttgttgcaacggatgtg
gcggcccgggggctggacgtggaggagatcagccatatcattcactaccgcctgccggat
gagatggaaatctacacccatcgcagtgggagaaccgcccgtgcgggaaaggccggggaa
tccatcgctcttgtcaacaccagggaaatacgcagaattcgcgagctggaggcccggcgg
aatatccggttcaccttttcgaaaatgccggacggccgggcgatctgcgaaaaacggctg
ttggggctgattggaaaaatcgtccgaacggaggtggacaaaacggacatcgatgcccat
ctgcccgccatattgaccgcactggcaccctttgacaaggaagagttgatcaagcgattc
ctgttcgcggagttcgaccggttcaacgcctactaccggacggcagaggatatccatgtg
aacgtcaagggtttgggtgccggaaagaccgccggatcaaaaacccctgctccgaaaaac
cgaacgacgctcagaaaaacgcgacggttcttcatcaatatcggccgtctggacaagatc
aacgcaaaggccgtcgcgcgtctcatcgcttcgaaaaccgggatcggcataaatatgatc
ggcgccgtcgatctgaaacgcgaattttcgttctttgaagtggagcggagcgctgcgaaa
aaaatccgggatgcctttgaaaacgtcgttctggacggtcgcaggatccaggttcgggat
gccgtaagggagccaaaggcttcctga
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