Desulfococcus multivorans: Dmul_09040
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Entry
Dmul_09040 CDS
T04568
Symbol
recD
Name
(GenBank) RecD: exodeoxyribonuclease V, subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dml
Desulfococcus multivorans
Pathway
dml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Dmul_09040 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dml03400
]
Dmul_09040 (recD)
Enzymes [BR:
dml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Dmul_09040 (recD)
DNA repair and recombination proteins [BR:
dml03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dmul_09040 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
Helicase_RecD
UvrD-helicase
SH3_13
AAA_22
AAA_16
SLFN-g3_helicase
nSTAND3
NTPase_1
AAA_28
SRP54
AAA
T2SSE
UvrD_C
Flavi_DEAD
ABC_tran
DUF87
AAA_5
CbiA
Motif
Other DBs
NCBI-ProteinID:
AOY57679
LinkDB
All DBs
Position
complement(1008864..1010726)
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AA seq
620 aa
AA seq
DB search
MTVKPRPYLEGTGLFSRLDIHFARFIGRIDDGASPEVYLAAALLSRNQRMGHICLDLASA
AKEIPASELAAAGITLPQPLSWADKLRQSPTVGSPTELAPLILDDRLRLYLHRYWEYQTL
IAKEIRKRVETTLTDLDMPRLSKGMSRLFPSPAGAETDETDWQRVAAFAAVTRRFSVISG
GPGTGKTTTVAKILALLLEQAGTVSFRIALAAPTGKAAARLREAVNREKARIDSPLRDAI
PESVSTLHRLLGSLPDTPYFRHNADQPLPVDLVVVDEASMIDVALMAKLIQAVPPQARLI
LLGDRDQLASVEAGAVLGDICDTGNFHHFSESFCRILGEITQEALTCPLDDGNESDAPQL
SDGVILLQKSYRFDEDSGIGRLSRRINAGDGDGALEVLASDAYPDVQWRTIPRAEDLPRA
VRKTVVSQFGAYLKHLDDPASAFQAFDRFRILGALRQGPFGVVRLNEIVEAILGSEGLIQ
SSVPWYPGRPVMVIRNDYALRLYNGDVGITMTDSAGRVRVWFPDGKGKFRSFSPLRLPEH
ETVYAMTVHKSQGSEFNQVLLILPSQDSPVMTRELLYTGVTRAVHCVEIWGLQPILLKAA
AHRIQRTSGLRDALWERTAP
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacagttaaaccacgcccatatctcgaagggaccggtctcttctcccgtctggatatt
catttcgcccgtttcatcggacgaatcgacgacggcgcttctccggaggtttacctggca
gcggcactcctcagtcgaaaccaacggatggggcacatctgtctcgatctggcctcggcc
gcgaaagagattcccgcaagcgaactcgcggcggcgggaatcacccttccccaaccgctt
tcctgggcggacaagttgaggcaaagccccaccgtcggcagccccacggaactcgcccct
ctgatcctggacgatcgccttcggctatacctgcatcggtactgggaataccagactttg
attgcaaaggaaatccgaaagcgcgtggaaaccacgctcacggatctcgacatgccgcgg
ctctccaagggaatgtcacgcctctttccatccccagccggcgcggaaacagatgaaacc
gactggcagagagtggccgccttcgcggccgtcacccgccgtttttccgttatctccggc
ggccccggcacaggaaaaacgacgacggtagctaaaattttagcactgcttctcgaacag
gcgggcacagtttctttcaggatcgccctggcggccccgacgggaaaagcggccgccagg
ctcagggaggccgtcaaccgggaaaaagcgcggatcgacagcccgcttcgggacgccatt
cccgaatcggtcagtacccttcaccgcctcctggggagcctgcccgacaccccttatttc
agacacaacgccgaccagccccttccggtggatctggtggtcgtggacgaagcctccatg
atcgacgtcgcgctcatggccaaactcatccaggccgttccaccccaagcccgcctcatc
ctcctgggtgatcgggatcagttggcatcggtggaggccggcgccgttctcggcgacatc
tgcgacacgggcaattttcaccatttttcagagtccttctgccggatcctgggtgagata
acccaagaagccctgacctgcccccttgatgacgggaacgaatccgatgccccgcagctt
tcagacggcgtcattctgctgcaaaaaagctatcgctttgatgaagacagcggcatcggg
cggctcagccgccggatcaacgccggcgacggcgatggtgcccttgaagtgctggcatcc
gacgcatacccggatgtccaatggcggacgattccccgggcggaagacctgccccgtgcc
gtccgcaagaccgtggtctctcagttcggagcctatctgaagcacctcgacgatccggct
tccgctttccaggctttcgatcgtttccggattctgggggcgcttcgtcaagggccgttc
ggcgtcgtccgcctgaacgagatcgtcgaggccatcctcgggtcggaaggcctcatacaa
tcctcagtgccctggtatccgggtcgcccggtgatggtcatccggaacgactatgccctc
cgactctataacggcgacgtgggaatcaccatgacggattcggccggacgcgtccgcgtc
tggttcccggacggcaaggggaaattccgatccttttcccctctccgtctcccagagcat
gaaaccgtatatgccatgaccgttcacaaaagccagggatccgagttcaaccaggtcttg
ttgatcctgccaagccaggattcacccgtaatgacccgagaacttctgtacacgggcgtc
acccgagcggtccactgcgtggagatctggggcttgcagcccatactgctcaaggcggcg
gcccatcggatccaacgcacctccggcctccgagacgccctctgggaacggaccgctccc
tga
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