Desulfococcus multivorans: Dmul_25240
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Entry
Dmul_25240 CDS
T04568
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
dml
Desulfococcus multivorans
Brite
KEGG Orthology (KO) [BR:
dml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dml03016
]
Dmul_25240
Enzymes [BR:
dml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Dmul_25240
Transfer RNA biogenesis [BR:
dml03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Dmul_25240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
AOY59296
LinkDB
All DBs
Position
complement(2838722..2840719)
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AA seq
665 aa
AA seq
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MEPGIVVEFIDRQKINCAVVLEADRQKLRLLAENNREIKMSEGRLLHASNRSLDLSGGRD
RLVAGLKETVRLREALSEKVDIQELWEVLNAEQNWIPLHTITELCFPDGADGDHESAVIR
AFFKNRLYFKFNQEGFYPYSAEQLVQLRAQAAEALRKHRLIEKGGEWLKRILEGSLPDCD
RMELSSDEKEFIKILTSYYLYEKESAYADLGKAITAKAGIGDIENLFQAFVKLGVWNSDE
NLDLYRYGIHTDFPEAVMTLTASLLKSSFPARSPARRDLGDLRMITIDGQSTLDFDDALS
IEDHGDHYFLGVHIADVGHFVETDCAVDREAVMRGSSIYMPDRKIPMLPPELAEGHCSLK
AGELRPGISTVIRLSRNADIESYEVFPSLIRVTDQLTYYDVNMIAEENRDISILFQIARK
FRQRRLADGAVHISLPEVNVWIDETGELIVNKTNRESPARLLVSEIMIMANWLMAEFLAE
RKLPAVYRSQPDPRERLFNENGGTLFQNWMQRKFLSRFILSPEPERHSGLGLSAYVTATS
PIRKYFDLVTQRQIRSVYGLNPAYTTTDIEKTIQALEQPMSAVIRIQNRRKRYWLLKYLE
KRIGQKEEAIVLARRKGFYLALMTDYMIECALPNTTGLNLKPEDVIQVTIQHVDARKDML
SVYMG
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaggaatagttgttgaatttatcgatcgtcagaagatcaattgcgccgtcgtg
ctggaagccgacagacaaaaacttcgattgttggctgaaaacaatcgtgaaatcaaaatg
tccgaaggccgattgctgcacgcgtcgaaccgaagtctggatctttccggcggaagggac
cggctcgtcgcagggctgaaagagaccgtccggcttcgggaagcactatccgagaaggtc
gatatccaggagctttgggaggtgctgaatgcggagcaaaattggattccgcttcacacc
atcaccgaactctgtttccccgacggtgccgacggtgatcatgaatcggcggtgattcgg
gcgtttttcaaaaaccgcctttacttcaaattcaaccaggagggtttctacccctattcg
gcggagcagttggttcaactccgcgctcaagccgccgaggctctccggaaacaccgactg
atcgaaaaaggcggagaatggctcaagcggattctggaggggtcgctgccggattgcgat
cggatggaactctcgtcggacgaaaaagagttcatcaagattctgacctcatattattta
tatgagaaagaaagtgcctacgccgacctcggcaaagccataacggctaaagcgggcatc
ggcgacatcgaaaatctatttcaggctttcgtcaagctcggcgtctggaattccgatgaa
aacctggatctctaccgatatggtatccataccgattttcccgaagcggtcatgacgctc
accgcgtccctgctgaaatcctcttttcccgcccgaagcccggcccgacgggatctgggc
gacctcaggatgatcaccattgacgggcagtcgacgcttgatttcgacgatgcgttgagc
atcgaggatcacggggatcactattttctcggcgttcatatcgccgatgtggggcatttc
gtcgaaacggactgcgctgtcgaccgggaggccgtcatgcggggaagctcgatctatatg
cccgaccgaaagattcccatgctgccgcccgagctggcggaagggcattgcagcctgaag
gccggagagctgcggcccggcatcagcaccgtcatccgcttgagtcgaaatgccgatata
gaaagttacgaggtctttcccagcctgatccgggtgacggatcagctgacctattacgac
gtcaatatgatcgccgaggagaacagggatatttcgattctgtttcagatcgccagaaaa
tttcgtcagaggcgtttggcggacggtgcggttcatatttctctcccggaggtcaacgta
tggatcgacgagaccggtgaactgatcgtcaacaagaccaaccgggagagcccggcccgg
ctgctcgtatcggaaatcatgattatggccaactggttgatggccgaatttctggcggag
agaaaactaccggccgtatacagatcacaacctgatccccgggaacggcttttcaatgaa
aacggcggcacgctttttcagaactggatgcagcggaaatttttgagccgattcatcctg
agccccgagcccgaaagacattcaggtctcggcttgagcgcttatgtgaccgcgacgtcg
cccatccggaaatatttcgatctggtgacccaacgacagatccgatcggtttatggattg
aacccggcatacacgacgaccgacatcgaaaagacgattcaggcgcttgaacagcctatg
agcgccgtaatccggatccagaaccgacgcaaacgctattggcttttgaagtacctcgaa
aaacgaatcggtcagaaggaggaagccattgtactggccagacgaaaaggcttctacctc
gccctcatgacggattacatgatcgaatgcgcactccccaacaccacgggtctcaatctc
aagcccgaggacgtgattcaggtcaccattcaacatgttgatgccaggaaggatatgctt
tccgtatacatgggctga
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