Desulfococcus multivorans: Dmul_29900
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Entry
Dmul_29900 CDS
T04568
Symbol
rpoC
Name
(GenBank) RpoC: DNA-directed RNA polymerase subunit beta\'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dml
Desulfococcus multivorans
Pathway
dml03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dml00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dmul_29900 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dml03021
]
Dmul_29900 (rpoC)
03400 DNA repair and recombination proteins [BR:
dml03400
]
Dmul_29900 (rpoC)
Enzymes [BR:
dml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dmul_29900 (rpoC)
Transcription machinery [BR:
dml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dmul_29900 (rpoC)
DNA repair and recombination proteins [BR:
dml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dmul_29900 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Rotamase
Rotamase_2
Rotamase_3
Alpha_E2_glycop
Motif
Other DBs
NCBI-ProteinID:
AOY59760
LinkDB
All DBs
Position
complement(3349883..3354253)
Genome browser
AA seq
1456 aa
AA seq
DB search
METLYDFFAKPMDPKNYKGVKIALASSEQIREWSHGEIKKPETINYRTFKPERDGLFCAK
IFGPTKDYECNCGKYKRMKHRGVICEKCGVEVIQSKVRRERMGHIDLATSVAHIWFLKSL
PSKIGNLLDLTLKNMEKVLYFDSYIVVDPKETGLTRGQLLTEEKYREARELYGYKFDAGI
GAEAVKILLQGLELEQLHRELREEINSTTSMAKRQKLSKRLKIVDAFRKSGIKPEQMIMD
VIPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLMDLNAPDIIVRNEKRMLQ
ESVDVLFDNGRHGRVITGTNKRPLKSLSDTLKGKQGRFRQNLLGKRVDYSGRTVITTGPN
LRLHQCGLPKKMALELFKPFIYYRLEQKGLVSTVKSAKKMVEREIPEVWDTLDEVVREYP
VMLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSVESQIEA
RILMLSSNNILSPANGSPIIVPSQDIVLGIYYMTREIPFSRGAGKRFSNVDEVRSAFDAD
AVDLHARISVRMDGKMVETTVGRVLLWEIIPKDSLLKMRHIEISDKETAKKILAEIRGGA
DFIEMVRRHSVSSDVEDDGMVGLLRQDEFRRIFNAKQVDIEDVFALSEGDVTEAIFGDGA
YHIFKILTKRPDIPFDTVNNVMDKKMLRELVDKVYRNLGAKATVILSDRLKDIGYKYSTL
GGLSISIDAMIIPEMKWEILKRAEEQVTEIGRQYTEGLITQGEKYNKVVDIWAKATDDVA
NEMMDAMKKAPLLDDEGNPRLDKDGRPILMEGFNPVFMMADSGARGSKDQMRQLAGMRGL
MAKPSGEIIETPITANFREGLSVLQYFISTHGARKGLADTALKTANSGYLTRRLADVAQD
CVVMEPDCGTIRGVEVEALMEGGEIIQRLGERVLGRTVAEENVRDPYTDEIIANIGDEID
ETVVAKIERAGLTKLKIRSVLTCNSAQGVCAACYGRDLAHGRRVEVGQAVGILAAQSIGE
PGTQLTMRTFHIGGTASRRVEQADIRARVEGNIQFIDVNVVRNADGELIVMDRQGGEFAI
VGKTGRELERFPVIYGAHILVKDGQEVKAGDLLVTWDPFTTPIITEVDGVIRYGDISLGK
TLQEKVDPVTGKSSRTIIESKLAEVRPRITIKGPDGKKMRYPLPVEAILLVEEGDTVKAG
DVLAKLPRATTKTKDITGGLPRVAELFEVRRPKETAVLSRIDGYVSIAKGPKGKQKVTVT
PVDGGDVEEYLIPRGKHINFYEGDYIRAGEPLIAGSAIPQDILTIKGEVALARYLVNEVQ
EVYRLQGVRINDKHIEVIVRQMMRRVKIKEVGDTEFIIEEQIDKSVFEAVNKEVKAKGGK
PAVAEPLILGITKASLSTDSFISAASFQETTKVLTEAAIAGAEDYLKGLKENVIMGRIIP
AGTGFPSYSELEIDSL
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
ttggaaacgttatacgatttttttgcaaaacccatggacccgaaaaactacaaaggggtc
aagattgccttggcatcctcggaacagattcgggaatggtctcatggggagatcaaaaag
ccggaaactatcaactaccggaccttcaaaccggagcgtgatgggcttttctgtgcaaaa
attttcggtccaaccaaggattacgaatgcaactgcggcaaatacaagcggatgaagcat
cggggcgtcatttgtgaaaaatgcggcgtcgaggtcattcaatccaaggtccggcgtgag
cgcatgggccatattgacctggcgacttccgttgcccatatctggtttctgaagagcctg
cccagcaaaattggcaaccttctggatctgactctcaaaaatatggagaaggtgctctac
ttcgacagctacatcgttgtcgacccgaaagagactggtcttaccaggggccagttgctg
accgaagagaaatatcgtgaggcgcgagagctatacggatacaagttcgatgcgggcatc
ggcgcggaggccgtaaaaatccttctgcagggcctggagttggagcaactgcaccgggaa
ctccgggaggagatcaattccacgacctctatggccaagcggcagaaactgtccaaacgg
ctcaagatcgtggacgctttccggaaatccggtatcaagccggagcagatgatcatggat
gttatcccggtgttgccgccggatctccggccattggtccctctcgagggggggcgcttc
gccacgtcggacctcaacgacctctatcgacgggttatcaatcggaacaatcgactcaaa
cggctgatggatctcaacgcgcccgacatcatcgttcggaacgaaaaacggatgcttcag
gaatccgtggacgtcctgttcgacaacgggcgacacggcagggtcattaccggaaccaac
aagcgcccgctcaaatccctgagcgacaccctgaagggcaaacaggggcggtttcgccag
aatctgcttggaaaacgagtcgattattccggtcgtaccgtcatcactaccgggcccaac
ctgcggctgcaccagtgcggtttgcccaagaaaatggctctcgagctgttcaagcccttt
atctactaccggcttgaacagaaagggctcgtctcgacggtcaaaagcgccaagaaaatg
gtcgagcgtgaaattcccgaggtgtgggacaccttggacgaggtagtgcgggaatacccc
gtgatgctcaaccgggccccgacattgcatcgattggggatccaagccttcgagccgacc
ctgatcgaggggaaggcgattcaacttcatcccttggtctgtacggcgttcaacgctgac
ttcgacggcgaccagatggccgttcacgtgccgttgtccgttgaatcccagatcgaggcc
cggatactgatgctctccagcaacaatatcctctctccggccaacgggagcccgatcatc
gtccccagtcaggacatcgttctggggatttattacatgacgcgggaaattccgttttcc
aggggggccgggaagcgcttttccaacgtggacgaggtccgatccgcttttgatgccgac
gcagtcgatctccatgccaggatttccgtcagaatggacggaaagatggtggagaccact
gtcgggcgggttctgctctgggagatcattcccaaagacagtctgctcaaaatgcgccac
atcgagatttcggacaaggaaaccgcgaaaaaaattctggcagagatccggggcggcgcc
gacttcatcgagatggtccgacgacactccgtgagcagcgatgtcgaggacgacggtatg
gtggggcttctgcggcaggacgaattccggagaatcttcaatgccaagcaggttgatatc
gaggacgtgttcgctctttccgaaggcgatgtgacggaggccatctttggcgatggtgcc
taccacatcttcaaaattctgaccaagcggccggatattcccttcgacacggtcaacaac
gtcatggacaagaagatgctgcgggagttggtggacaaggtttatcgaaacctgggcgcc
aaggcgaccgtcatcctgtcagaccgcctgaaagacatcggatataaatattcgaccctg
ggggggctttccatctccatcgacgccatgatcatccctgagatgaaatgggagattctc
aaacgggcggaagagcaggtgacggagatcggtcgacagtataccgaaggtctgatcact
cagggagaaaaatacaacaaggtggtcgatatctgggccaaggctacggacgacgtcgcc
aacgaaatgatggatgccatgaaaaaggccccgcttctggacgatgagggaaatccccgt
ctcgacaaggacggccggcccattctcatggaaggcttcaacccggtcttcatgatggcc
gattccggcgctcgaggcagcaaggaccagatgcggcagctggcgggcatgcgggggttg
atggccaagccgtcgggagagatcatcgaaaccccgatcacggccaatttccgcgaaggc
ctttcggtgctgcaatacttcatttccacccacggcgcccggaaaggtctcgccgacact
gccttgaaaaccgcgaactccggttatctcacccggagacttgccgatgtagcccaggat
tgcgtggtgatggagccggattgcggcaccatccggggcgtggaggtggaggcgctcatg
gaaggcggcgagatcattcagcgtctgggcgaacgggttctgggacggacggtggcggag
gagaatgtgcgggatccatacaccgacgagatcattgccaacatcggcgacgagattgac
gaaaccgtcgtggcgaagatcgagagggcgggcctcaccaaactgaaaattcggtcggtg
ttgacctgcaacagtgcccagggcgtctgcgccgcatgctacggcagggaccttgcccac
ggaagacgggtcgaggtcggtcaggcggtcggcattctggccgcccagtccatcggagag
ccgggcacccagctgaccatgcggactttccacatcggcggtactgccagtcggcgtgtc
gagcaggcggacatccgggcacgggtggaaggcaacatccagttcatcgatgtcaacgtg
gtcaggaacgccgacggtgaactgatcgtcatggaccgtcagggcggcgaattcgccatc
gtcggcaagaccggtcgggagctggagcggtttccggtcatctacggtgctcatattctc
gtcaaggacgggcaggaggtgaaggccggcgacctcctggtgacatgggatcccttcacg
acgcccatcatcaccgaagtggacggcgtcatccgatacggcgacatctcgctggggaaa
accctccaggaaaaggtcgaccccgtcaccggaaaatcgagccggacgatcatcgagtcc
aagttggcggaggtccgccccaggatcaccatcaaggggccggacggaaaaaaaatgcgc
tatccactccctgtggaggccattctcctcgtggaggaaggcgacacggtaaaggcgggc
gacgtattggcaaagctgcctcgcgccaccaccaagaccaaggatatcactggtggtctt
ccccgcgtcgcggagcttttcgaagtccgtcggcccaaggagacggcggtgctgagccgg
atagacggatacgtctccatcgccaaggggcccaaaggcaaacagaaggtgacggtgacc
cccgtggacggcggggatgtcgaggagtacctgattcctcgaggcaagcacatcaatttc
tacgagggggactacatccgcgcgggcgagcccctcatcgccggctccgccatcccccag
gatattctgaccatcaagggcgaggtcgctctggcgcgatacctggtcaacgaggttcag
gaggtgtatcgcctccagggcgtgcgcatcaatgacaagcatatcgaggtgatcgttcgg
cagatgatgcggcgcgtcaagatcaaggaagtgggggacaccgagttcatcatagaggaa
cagatcgataaaagcgtgttcgaagcggtgaataaggaggtcaaggccaagggcgggaaa
ccggcagtagccgaacccctgattctgggcatcaccaaggcctccctcagtacggacagt
ttcatttccgcggcttctttccaggaaacgaccaaggtgctcaccgaggcggccattgcc
ggtgccgaggattatctcaagggactcaaggaaaacgtcatcatggggcgcattattcca
gcgggaacgggatttccgtcatattccgagctggagatcgattccctctga
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