Desulfococcus multivorans: Dmul_35400
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Entry
Dmul_35400 CDS
T04568
Symbol
pnp
Name
(GenBank) Pnp: polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dml
Desulfococcus multivorans
Pathway
dml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dmul_35400 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dml03019
]
Dmul_35400 (pnp)
03016 Transfer RNA biogenesis [BR:
dml03016
]
Dmul_35400 (pnp)
Enzymes [BR:
dml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Dmul_35400 (pnp)
Messenger RNA biogenesis [BR:
dml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Dmul_35400 (pnp)
Transfer RNA biogenesis [BR:
dml03016
]
Prokaryotic type
tRNA degradation factors
Dmul_35400 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_KhpA-B
KH_2
S1_RRP5
KH_SLS1_2
KH_Vigilin
Motif
Other DBs
NCBI-ProteinID:
AOY60309
LinkDB
All DBs
Position
3992619..3994712
Genome browser
AA seq
697 aa
AA seq
DB search
MELTLTADLGGNPLSIQTGKVAKQASGAVVVQYGETVVLVSAVSAYETRSGLDFLPLTVE
YQEKIYAAGRIPGNYMRREVGRPSEKETLTARLIDRPIRPLFPKGYHSEIQVIATVLSMD
QENDPDVLAMIGASAALQISDIPFQGPIAAVRVGRIDGKFVVNPGMSRQSESDINIIVAG
SKTGVVMVEGGGNIVSEEEMLDAIFFGHAAMQPVIEIQEKLTEALGKPKRPHEPPPKDQA
LIEKLDAMTSTRIRESILIPEKTARHTALRELRNQIMADLGEDYADRKGEIYEILHDIER
TLCRNLILQEGRRIDGRKFDEIRPITCEVGVLPRPHGSALFTRGETQVLGVLTIGSGQDE
QRVETLYGDDPQRFMLHYNFPPFSVGEVKRMGGPSRRDIGHGGLSKRALERILPKPEDFD
YTIRIVSEVLESNGSSSMGTVCSGILALMDGGVPITAPVSGIAMGLVKEGDQVVILSDIL
GDEDHTGDMDFKVAGTRDGITALQMDIKILELSKDVMEKALAQAREGRIFILEKMLQALE
APRKEISPYAPKMITVKINPDKIREIIGPGGKVIRAIQSETNTKIEIDDSGLVKIAATSQ
QEGDAALQRINEITAEPEVGAVYEGTVVKTMDFGAFVQIFPGTDGLVHISQLARERVKKV
TDVVKEGDTLRVKILEINRDGKIRLSHKAVLEEEDGA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggaattgacattgacagcagatctcgggggcaatcccctgagcatccagacgggcaag
gtggccaaacaggcctccggcgcggtggtggttcaatacggagaaacggtcgttctcgtc
agcgccgtttccgcctatgaaacccgatccgggctggacttccttcccctcacggtcgaa
tatcaggaaaaaatctatgccgcgggtcgcatcccggggaattacatgcgacgggaagtc
ggacggcccagcgagaaggagacccttacggcccggttgatcgaccggcccatccgcccc
ttgttccccaaggggtatcacagcgaaatccaggtcatcgccacggtcctgtccatggat
caggagaacgatcccgacgttctggccatgatcggggcatcggcggctctccagatctcg
gatattccgtttcaaggtcccatcgccgcggtccgtgtgggccggatcgacggaaagttc
gtcgtcaaccccggcatgagccggcagtcggaaagcgacatcaacatcatcgtggccggc
tccaaaaccggcgtggtgatggtggaaggcggcggcaacatcgtgagcgaagaggagatg
ctggacgccatctttttcggccatgccgccatgcagccggtgatcgagatccaggagaag
ctgacggaggcgttgggcaagcccaagcggcctcacgaaccgccccccaaggaccaggcc
ctgatcgaaaaactcgacgccatgacctcgacacggatccgggagtcgatcctgattccc
gagaagacggcacgccataccgctctcagggagctgcgaaaccagatcatggccgacctg
ggcgaggactacgccgatcgcaagggcgagatttacgagatcctgcacgacatcgaacgg
actctctgcaggaatctcatccttcaggagggacggcgcatcgacggcagaaagttcgat
gaaatccggcccatcacctgtgaggtcggcgtcctgccgaggccccacgggagcgcgctc
ttcacccggggggagacccaggtcctcggggtgctgaccatcggctccggtcaggacgaa
cagcgggtggaaaccctctacggagacgaccctcaacggttcatgctccactacaatttc
ccgcccttttccgtcggggaagtcaagcgcatgggcggccccagtcgtcgagacatcggc
cacggcggtctatccaagcgcgccctggaacggattctgccgaagccggaagatttcgat
tacaccatccgcatcgtttccgaggtcctggaatccaacggatcctcctccatgggaacc
gtctgctcggggatcctggccctgatggacggcggcgtgcccatcacggcgccggtatcc
ggcatcgccatgggcctggtcaaggaaggggaccaggtggtgatcctctccgacattctg
ggggatgaagaccacaccggcgacatggatttcaaggtggccggcacccgggacgggatc
accgccctccagatggacatcaagatcctcgagctctcgaaggacgtcatggaaaaggct
ctcgcccaggcgcgggaaggccggatcttcatcctggaaaagatgctccaggccctcgag
gcaccccggaaggaaatttccccttacgcccccaagatgatcaccgtcaagatcaatccc
gacaagatccgggaaattatcggcccggggggaaaggtgatccgggcaatccagagcgag
accaacaccaagatcgagatcgatgactccggtctggtcaagatcgccgccacatcccag
caggaaggcgatgcagccctgcagcggatcaacgagatcaccgccgaaccggaggtgggt
gccgtttacgagggtaccgtcgtcaagaccatggacttcggcgcctttgtccagatcttc
ccggggaccgacggcctcgtccatatttcccagctggcccgggaacgggtcaagaaggtg
acggacgtggtgaaggagggcgacactctccgggtcaaaattctcgagatcaaccgggac
ggcaagattcgcctgagccacaaagcggttctggaagaggaagatggggcttga
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