KEGG   Desulfonema magnum: dnm_002040
Entry
dnm_002040        CDS       T07102                                 
Name
(GenBank) Site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
dmm  Desulfonema magnum
Brite
KEGG Orthology (KO) [BR:dmm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dmm02048]
    dnm_002040
Enzymes [BR:dmm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     dnm_002040
Prokaryotic defense system [BR:dmm02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   dnm_002040
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1RH-like_C ResIII T1R_D3-like DEAD
Other DBs
NCBI-ProteinID: QTA84210
UniProt: A0A975GK71
LinkDB
Position
complement(162465..165623)
AA seq 1052 aa
MSNDYTEDKLIQETTINYFRETLGWETEYAYNTEVLGKDGTFGREHEKAVILTRHLRSAL
ETLNPGLPQAAYTEAIETIVSASISKSLIQTNKEKYEYLKNGVPVSLRNDKGETETLKLK
LFDFSTPANNHFLAVRELWIQGNPYRRRPDIIGFVNGIPLLFIELKNIHKDINAAYINNL
SDYKDTIPHIFHHNALIILSNGDEGKIGSISGKYEHFSQWKRLGEEDKGVVEFETLLKGV
CAKENLIDIFENFILFDESSGKTIKIIARNHQFLGVTRAVESLENRKAKHGQLGVFWHTQ
GSGKSYSMVFFCQKIHRKFKGNYTFVIVTDRRELDTQIYETFAGTGAVTGKHVRASSGEH
LEELLTQDHRYIFTLIHKFNQETETPYSERHDIIVISDEAHRSQYGRLALNMRNALPNAS
FIGFTGTPLFEEDEITRKVFGNYVSTYNFKRATEDGATVPLFYENRGEKLNITDRSINEK
IAAKLEEYDLNPDEEARLERDLSREYHIITAEKRLDKIAKDLVEHYTARQDTGKAMVVCI
DKLTAVRMHNLIDKYWKARIPKLEKEIQNTTDDQEKSELKKQLERMKETEYAVVISEEQN
EVRKFQNWELDIIPHRKKMKERDLDKEFKDNSHPFRLAIVCAMWLTGFDVESLSTLYLDK
PLKGHTLMQAIARANRVYEGKNNGLIVDYIGVLKHLRKALAAYAGTRGNEESDPPVRPKQ
ELIQELEEAISETESFLKTSGFDLENLLTSEGFDKIRAIKDAVNAVYTTDETKKQFEILA
REVFQKFKAVLPDPVINDFRPRHDAIRIIYKTLQENKENADISDVMKSLHEIIDNAVESE
TQVSEPTEDFGKIYDISGIDFEQLKQEFSKSERKNTAVHSLKDRIEAKLRKMIAQNPLRI
DYYKHYQDIIQEYNCEKDRATIEETFEKLMDFVKNLSEEAARAAKEELNEEQLAIFDLLE
KPELSTRDRNKIKKTAVVLLDTLKKDQLGVDNWREKTATAGGVKSYIYDYLFVSLPVESY
SDAEVDEKTEFVFNHIYQQYPRYDNNVYARAC
NT seq 3159 nt   +upstreamnt  +downstreamnt
atgagcaacgactacaccgaagacaaactcatccaggaaaccaccatcaactatttccgg
gaaacattgggatgggaaaccgaatatgcctataacaccgaagttctcggcaaagacggc
acctttggccgggaacacgaaaaagcagtcatcctcacccgccacctccgcagcgcattg
gaaacattaaaccccggtctgccccaagccgcatacaccgaagccattgaaaccatcgtc
tccgcaagcatctccaaatctctcatccagaccaacaaagaaaaatacgaataccttaaa
aacggcgtaccagtctcactcagaaatgacaaaggcgaaaccgagaccctgaaactgaaa
ctctttgacttcagcacgcccgctaacaatcatttcttagccgtccgagaattatggatt
caaggaaatccgtaccgcagaagaccggacatcatcggctttgtcaacggcattcccctc
ctgttcatagaactcaagaacattcacaaagacatcaacgccgcgtacatcaacaacctc
agtgattacaaagacaccattccccacatctttcatcacaacgcgctcatcatcctgagc
aacggtgatgaaggcaaaatcggctccatatccggcaaatacgaacatttcagccaatgg
aaacggcttggagaagaagataaaggcgtggttgaatttgaaacccttctcaaaggcgta
tgcgccaaagagaacctcattgacatctttgaaaacttcatcctgtttgatgaaagctcc
ggaaaaaccataaaaatcattgcccgcaaccatcagtttttaggcgtgacccgggccgtg
gaatccctggaaaacagaaaagcaaagcacggacaactgggggttttctggcatacccag
ggaagcggaaaatcatattcaatggtctttttctgccagaaaatccatcggaaattcaaa
gggaattatacctttgtcatcgtgacagaccggcgggaacttgacacccagatatatgaa
acctttgcaggcactggcgctgttaccggcaagcatgtccgcgcatccagcggcgaacat
cttgaagaacttctcacacaagaccaccgctacatcttcacactgattcacaaattcaac
caggaaactgaaaccccatattcggaacgacacgatatcatcgtcatatctgacgaagcc
catcgctcccaatacggcagactggccctgaacatgagaaacgccctgcccaatgcctca
ttcatcgggtttaccggaacgcctctgtttgaagaagatgaaatcacaagaaaagtattt
gggaattacgtttccacatacaatttcaaacgggcaacagaggacggggcaactgttccg
ctcttttatgagaaccgcggcgaaaaactgaacatcacggacaggagcatcaatgaaaaa
attgctgcaaaacttgaggagtacgatctgaacccggacgaggaagccagactggaaaga
gatctttcccgcgaatatcatatcatcaccgcggaaaaacgcctggacaaaattgccaaa
gaccttgtggaacactacaccgcacgccaggacaccggaaaagccatggtcgtctgcatt
gacaaactcaccgccgtccgaatgcacaacctgattgacaaatactggaaggctcgcatc
ccaaagcttgaaaaagaaattcagaacacgacagatgatcaggaaaaatcagaactgaag
aagcagttggaacggatgaaagaaacagaatatgctgtggtgatcagcgaagagcagaac
gaagtcagaaaattccaaaactgggaactggacattattccccatcgtaaaaaaatgaag
gaaagagaccttgacaaagaattcaaagataactcgcatcccttccgcctcgccatagtc
tgcgccatgtggctcaccggttttgatgtggaaagcctttccactctgtatcttgacaag
cccctgaaagggcacaccttaatgcaggccattgccagagcgaaccgggtatatgaaggc
aaaaacaacgggctgattgtggattatatcggcgtgttaaagcatctgcgaaaagcattg
gccgcgtatgccggaacccgcggcaacgaggaatctgatccgcctgtcagacccaaacaa
gaactcatacaggaacttgaagaagccatctcggaaaccgaatcttttcttaaaacatcg
ggctttgatttggagaatttgctgacctcagaaggctttgataaaatcagggcgatcaaa
gacgctgtgaacgcagtttacaccacagatgaaaccaaaaaacaatttgaaatcctcgcc
agagaagtctttcaaaaattcaaagcagttctgcctgatcctgtgatcaatgacttcaga
ccccgccatgatgccatccgcatcatttacaaaacactgcaagaaaacaaagaaaatgcg
gatatctcagatgtaatgaaatccctgcatgaaatcatagacaacgctgtggagtcagaa
actcaggtcagcgaaccgaccgaagattttggaaaaatttatgacatcagcggcatagac
tttgaacaactgaaacaggaattctcaaaatccgagcggaaaaatacagcggttcattcc
ctgaaggaccggatagaagccaaattaagaaaaatgatcgcacagaatcccctgcggata
gattattacaaacactatcaggatattatccaggaatataactgtgaaaaagatcgggcg
accattgaagagacctttgagaaactgatggactttgttaaaaatctctccgaagaagcg
gcccgggctgccaaagaggaactgaatgaggaacaactcgccatctttgacttgttagaa
aaaccggaactttcaacccgtgatcggaacaagatcaaaaaaacggctgttgtcctcctg
gacaccctgaaaaaagaccagctcggggtggataactggagagaaaagacagccaccgca
ggcggagtgaaatcctacatatacgattacttatttgtgagcctgccagttgaatcctat
tcagatgccgaggtggatgagaaaaccgaatttgtatttaatcatatttatcagcagtat
ccgagatatgacaacaatgtttatgcaagagcctgctga

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