Desulfonema magnum: dnm_010890
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Entry
dnm_010890 CDS
T07102
Symbol
priA
Name
(GenBank) Primosomal protein N
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dmm
Desulfonema magnum
Pathway
dmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
dnm_010890 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmm03400
]
dnm_010890 (priA)
Enzymes [BR:
dmm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
dnm_010890 (priA)
DNA repair and recombination proteins [BR:
dmm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
dnm_010890 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
ResIII
DEAD
Zn_ribbon_PriA
Helicase_C
nSTAND_NTPase5
Zeta_toxin
Zn_ribbon_6
PIF1
AAA_30
SLFN-g3_helicase
SRP54
TFA2_Winged_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QTA85085
UniProt:
A0A975BGX5
LinkDB
All DBs
Position
complement(821015..823456)
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AA seq
813 aa
AA seq
DB search
MTPHSAYIEVAITLPIDKTFIYGVPETLFSFASPGKRVLVPFGRRRLTGYILGPGEYTDK
YEIKVILDVLDETPLFPPSMIPFFKWIADYYIHPLGEVIHSALPKGLNIYDFVTLSITEV
GKNALSEDDITPLRREILGQLQQGPCQLKTLCKKLNRDIPNSLLHVMETSGWLVRERTLG
GGKTRSRTERYVSLIRSDIPDDRFYASRKKIIDLLEAQGGISIRNLKEQLPKSAGFIKFL
SDSGYISVFEKKVYRDPFGDPIQPDTPHTLTEEQGKVISKITDSLEKGFAAYLLAGVTGS
GKTEVYMQIAAEVIRQEKSVLVLVPEIALISQMERRFRARFGDCVAVLHSGLSSGERYDQ
WIRIINNEARITIGARSAIFAPFRDIGLIIVDEEHDTSYKQENDFPYNARDIAVVRAKLS
DGVAVLGSATPSVQSYHNVKTQKFEEVTLTERVEKRPLPNITVVDLRKSRDNHGISRFIT
PELYQAMKETLGRGEQILLFLNRRGFAGFPVCAACGDPVGCENCDITLTFHQAEKAYKCH
YCGFTLPSDAKCPTCNSSSIKLLGLGTEKTEAAVKSLFPDARVARMDRDTTTRKGTILNI
LKDIRNHKTDILVGTQMVAKGHDFPGITLVGIICADLSLCFPDFRAGERTFQLLAQVAGR
AGRGDVPGRVILQTYNPNHFSMVCAREQDFRRFYDKEILFREALSYPPVSRLIQLKISGK
DKGKTREFALAMGEICHDLQKNNEAFSSSVQILGPIEASVSKIANQYRWQILLKGLNVKQ
LHRFVRQLMSKNSFMFNYRGVKVVVDVDPFLMF
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgacaccacattcagcatatatcgaagtagccatcacgcttcccatagacaagacgttt
atttacggtgtgccggagacacttttctcttttgcatctcccggaaaaagggtgctggtt
ccctttggcagacgcaggcttacaggatacatcctcggaccgggtgaatacacagacaaa
tatgaaatcaaagtgattctggatgtccttgatgagaccccgctctttcctccttccatg
ataccgtttttcaaatggattgcggactattatattcatccgctgggcgaggtcatccac
agcgcgcttcccaaggggctgaatatttatgattttgtcaccctgtccattacagaagtg
ggtaaaaatgcgctttccgaggatgatattactccgttaagacgtgaaattttaggccag
ttgcaacaaggcccctgccagttgaaaacactctgtaaaaaactgaaccgggatattccc
aattctctgctccatgtcatggaaacatccggatggcttgtcagggaaagaaccctgggg
ggcgggaaaacacgctcaagaacagaacggtatgtctcgttaattcgctctgatattcct
gatgacaggttttacgcatcccgaaaaaaaatcattgatctgttagaagcccaaggtgga
atttccataagaaatttaaaagaacagcttccgaaatccgcgggattcataaaatttttg
tcggattcaggatatatttcagtatttgaaaaaaaagtttaccgggacccttttggtgat
cccatacagccggatacccctcatacgcttacggaagagcagggaaaagtcatttccaaa
atcacagattccctggaaaaaggatttgcagcatatctcctcgcaggggttaccggaagc
ggaaaaaccgaagtatatatgcaaattgcggctgaggtcatcagacaagaaaaatccgtg
ctggtgctggttcctgaaatcgccctcatatcccagatggagcggcggtttcgcgcccgt
ttcggagactgcgtggcagttctccacagcgggctttcatctggcgagcgatatgatcag
tggatacgcatcattaacaatgaagcccggattaccatcggagcaagatcagccattttt
gcgccctttcgggatattggtctgattatcgtggatgaggagcatgatacgtcctacaaa
caggagaatgatttcccttataatgcccgggatattgcggtggtcagggcaaagctgtca
gacggcgttgccgtgctcggatccgccacaccttcggttcagtcttatcataatgtgaaa
acccaaaaattcgaggaagtcaccctgaccgagcgggtggagaaacgcccgcttccgaat
atcacggttgttgatcttcgcaaaagcagggataaccacggtatcagccgttttattacg
ccggaactttaccaggcaatgaaagagaccctgggacgcggggagcagattcttctcttt
ctgaaccgccggggctttgccggtttcccggtctgtgccgcgtgcggagaccctgtggga
tgtgagaattgcgatatcaccctgacatttcatcaggcggaaaaggcgtataaatgccat
tactgcggtttcacgctcccgtctgatgcaaagtgcccgacctgtaattcttccagcatc
aagctcctggggcttggcacggaaaagaccgaggcagcagtgaaatcccttttcccggat
gcaagggtcgcgagaatggacagggacacgaccacacggaaaggcacgattttaaacata
ttgaaagatatcagaaatcacaagacagatattcttgtgggaactcagatggtggcaaaa
gggcatgattttccggggattacgctggtggggattatttgtgcggatctttcgctctgt
tttccggatttccgggccggagaacggacgtttcagcttttggcccaggtcgcgggaaga
gccgggcggggagatgtcccggggcgggtcattctccaaacgtataatccgaatcatttc
agcatggtctgcgccagagaacaggatttcaggcgtttttatgacaaggagattcttttc
cgagaagccctgagctatccgccggtctcaagactgattcagttgaaaatttcaggcaaa
gacaagggcaaaacccgtgaatttgctttggctatgggtgagatttgtcatgacttgcag
aaaaacaatgaggcattttcatcatctgtgcaaatattgggtcccattgaggcgtctgtt
tccaagatcgcaaaccaataccggtggcagattcttctgaaaggactcaatgtgaaacag
cttcacaggtttgtccgtcagctcatgtccaaaaattcgtttatgtttaattatcggggg
gtcaaagtcgttgtggatgtggatccgtttttgatgttttga
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