KEGG   Desulfonema magnum: dnm_018280
Entry
dnm_018280        CDS       T07102                                 
Name
(GenBank) Chaperone protein ClpB
  KO
K11907  type VI secretion system protein VasG
Organism
dmm  Desulfonema magnum
Pathway
dmm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dmm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    dnm_018280
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dmm02044]
    dnm_018280
Secretion system [BR:dmm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   dnm_018280
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_16 AAA_5 AAA_22 Clp_N nSTAND3 ATPase_2 AAA_7 TniB DUF815 AAA_25 Sigma54_activat AAA_24 NACHT Zeta_toxin Torsin Cac1_C Hpr_kinase_C
Other DBs
NCBI-ProteinID: QTA85813
UniProt: A0A975GMG1
LinkDB
Position
1403324..1406107
AA seq 927 aa
MSLDLQTLIAKLNVTCRKGLEKAAQLCVSYTNYNVEIEHLLMTLLDIPDADIQRVLRYYE
VSSEDVNKELTLSIEKFRRGNSRTPALSQHILRILEQAWMIASLRFDSDTVRTGAILLAL
LEDDALRAMLFETSPSLKRIPKDAIKNDIREIIRFSGEETRNSKLETGNSKFESPLATDH
SPLTTDHSPLATRPSPLTKTPNLNQYTIDLTGRVRSGLVDPIQGRDMEIRQIIDILTRRR
QNNPILTGEAGVGKTAIVEGFATRIVKGDVPPPLRNVSVRILDLGLLQAGAGIKGEFEKR
LKSVIEEVKTSPRPIILFIDEAHTMIGAGGPAGMGDAANLLKPALARGELRTIAATTWGE
YKKYFEKDPALTRRFQVVKVDEPTEEEAVEMLRGLVFNLEAHHSVIILDEAVQDAVRLSK
RYISGRHLPDKAISVLDTACARVAIVQNSTPPQIEYIYYRKKQAELELVILKREQASGRN
HAARTEELSGELEALKKRGEELEARWKDELRLVERLIEIQKNLEKTSELKQTSEVSKTSE
VSVSETSEVSVSEISEISLEQLSEERIKLRQELEMLQQADPMIHICVDSGIIATVISNWT
GIPVGKMLTNEIEGILHLKENMEERIIGQSQALDTICRRIRTFRANLDDPGKPAGVFLLI
GSSGIGKTETALTLADLLYGGEENMVTLNMSEYQEPYTVSGLKGSPPGYVGYGQGGVLTE
AVRRKPYSAVLLDEVEKAHPDVMELFYQVFDKGTLEDSEGLSVDFKNTIILLTSNIGTDT
ILEACHDFNNMPDAETLVKLVWPDLLQRFKPAFLGRLVVVPYYPLTDEVIRKIVRLKLDR
IRQRFLENHRTEFTYSEELVAAIGARCMEVDTGARNVDHLLTHTMLPELSGELLRRMAVG
EICIGIHVDLDESGGFAYHFDPIADEP
NT seq 2784 nt   +upstreamnt  +downstreamnt
atgagccttgacctgcaaacactcattgcaaaactgaatgtgacctgtcggaaaggactt
gagaaggcagctcagttgtgtgtctcctataccaattataatgtggagatcgagcatctg
ctgatgacactgctggatatccccgatgcggacatacaaagagtgttgcgttattatgag
gtcagttctgaggatgtcaataaggaactgaccctctcaattgagaaattcagacgaggc
aatagccgcacgcccgcgctttctcagcacattctccgaatccttgaacaagcctggatg
atagcttcactccgttttgactccgatacggtaagaaccggagccattcttcttgccctt
ctggaagatgacgcacttcgggcaatgctgttcgagacctccccctcgctcaagcggatt
ccgaaagatgccatcaaaaatgatatccgtgaaatcatccgcttttcaggtgaggaaact
cgaaactcgaaactcgaaactggaaactcgaaattcgaatcaccactcgccactgaccac
tcgccactgaccactgaccactcaccactcgccactcgcccctcaccactcaccaaaacc
cccaacttgaatcagtacaccattgacctcacaggacgagtcagaagcggtctggtggac
cccattcagggccgtgacatggagattcgccagattattgatattctgacccggagacgg
cagaataatcccattctcaccggcgaggcaggtgtgggaaaaacagccattgtcgagggg
tttgcaacccgcatcgtcaaaggagatgtgccgccgcccctcagaaatgtttctgtgcgt
attcttgatctggggcttctccaggcaggggcagggataaaaggagaatttgaaaaacgc
ctgaaatccgttattgaggaggtgaaaacttctccccgccccatcattctctttattgac
gaggcgcataccatgatcggcgcgggcggtcccgcaggcatgggagacgctgccaatttg
ctcaaaccggcattggctcggggagaactccgcaccattgcagcgacaacctggggtgaa
tataagaaatattttgaaaaagatccggcgctgacgcggcgatttcaggtggtcaaggtg
gatgagccgactgaggaggaggctgttgagatgctccgaggactggtgtttaatcttgaa
gcccatcatagcgtcattattctggatgaggcggtgcaggatgcggttcggctatccaaa
cgctatatttcaggaagacatttgccggacaaggccatcagtgttctggataccgcttgt
gcgcgtgttgccatcgttcagaacagcacgccgcctcagattgaatatatatattatcga
aaaaaacaggcagaattggagcttgtcattctgaagcgggagcaggcttcaggccggaat
catgctgcacggacagaggaattgtcaggtgaattggaagcattaaaaaagagaggtgag
gaactcgaagcacgttggaaagatgaactcagactggtggaacggttgattgaaattcag
aaaaatttagaaaagacctccgagttgaaacagacctccgaggtttctaaaacctcggag
gtctcagtctcggaaacctcggaggtctcagtctcggaaatctcggagatatcacttgaa
caactaagcgaggaacgcatcaaactgagacaagaactggaaatgttgcaacaggctgat
cccatgattcacatttgtgtggattccgggatcattgccactgtcatctccaactggaca
ggcattcccgtgggcaagatgctgacaaacgagatagaggggattcttcatctcaaggaa
aacatggaggagcggattatcggacagtcccaggcattggacaccatctgccggcggatt
cgcacattccgggcaaacctggatgatccgggcaaacccgcgggcgtgtttctcctgatc
ggttcaagcggcattggaaagacagaaaccgccctgacccttgcggatctgctttacggc
ggagaggagaatatggtgacgctgaatatgtccgaataccaggagccttataccgtatcc
gggctgaaaggctctcccccgggttatgtgggctacggacagggcggcgtgctgaccgag
gcagtccggcgcaaaccctacagcgcagtccttttggatgaggtggaaaaggcgcacccg
gatgtcatggagttattttatcaggtctttgacaaggggacactggaggattccgaagga
ttatccgtggacttcaaaaacacgattattctgctcacctccaatatcggcacggacacg
attttggaggcatgtcatgatttcaacaatatgccagacgcggaaacactggtgaaactg
gtatggcccgaccttttgcagcgattcaaacctgctttcctggggcggctggtggttgtg
ccgtattatccgctgacagatgaagtcattcgcaaaatcgtgaggctgaagttagacaga
atccgccaaagatttcttgagaatcaccggacagaatttacttacagtgaggaacttgtc
gcggccatcggcgcacggtgcatggaggtggacactggcgcacgcaacgtggatcatctc
ctgacacacaccatgctgcctgaactttcaggagaactcctccggcgcatggcagtggga
gaaatctgtatcggcattcacgttgatcttgatgaatccggagggtttgcatatcatttt
gatccgatagcagacgaaccttga

DBGET integrated database retrieval system