KEGG   Desulfonema magnum: dnm_018690
Entry
dnm_018690        CDS       T07102                                 
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V, subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
dmm  Desulfonema magnum
Pathway
dmm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dmm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    dnm_018690 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dmm03400]
    dnm_018690 (recD)
Enzymes [BR:dmm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     dnm_018690 (recD)
DNA repair and recombination proteins [BR:dmm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     dnm_018690 (recD)
SSDB
Motif
Pfam: AAA_19 AAA_30 RecD_N UvrD_C_2 Viral_helicase1 AAA_11 Helicase_RecD SH3_13 UvrD-helicase AAA_22 SLFN-g3_helicase UvrD_C nSTAND3 PhoH SRP54 AAA_5 AAA_16 T2SSE PIF1 NTPase_1 AAA_28 CbiA ResIII AAA_7 TrwB_AAD_bind NPHP3_N
Other DBs
NCBI-ProteinID: QTA85854
UniProt: A0A975BIP4
LinkDB
Position
1435023..1436867
AA seq 614 aa
MKKDMITQICDSGVFSPLDIHFARFMAKLAKKDVDKIALAAALVSHHKQKGHICLDLSSV
KKNLDIPFSYPDLEDWLGKLRKSSAVGNPGQYKPMILDDKSRVYLYRYWEYQDKLAALIK
TRTTEQAEDIDMAVLKKGLERLFPANQTDETDWQKVAAFTALMKNFCVISGGPGTGKTTT
VTKILALVLEQNRKQSIALAAPTGKAAARLQESILREKNKKPYEGVREAIPEDASTIHRL
LGSVPGSPYFRHNAGNPLSADVVVIDEASMVDMALMSKLVQSLSPRTRLILLGDKDQLAS
VEAGAVLGDICDTGNIHSFSEKFCEDFRQITGHAIRVPSDDNAEPATPRRNRSEMSNSVV
QLHKSYRFDKNSGIGAVSHAVNSGDAEAALTHMKKGEYGDICWKTLPRPDALPRDIKDTV
IQGFQSYLKAIDDPLKMFELFDRFRILCAIRQGRYGVAAVNIYVEWILRQANLIQPYRTW
YKGRPVMITRNDYHLRLFNGDIGITLPDADANGEAKVFFPDTEGTLRKLHPFRLPEHETV
YAMTVHKSQGSEFDKVLLLLPNKDSPVLTRELIYTGITRAKENAEVWGTERVFRDAVSRR
IERASGLRDALWET
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgaaaaaagacatgataacacaaatctgcgacagcggagtattttctcctctggatatc
cattttgccagatttatggcgaaacttgcgaaaaaagatgttgacaaaattgctctggcc
gcggccctggtaagccatcataaacaaaagggacatatctgccttgatctttcatctgtt
aagaagaacttggatatccccttttcgtatcctgatttggaggactggctcggaaaactc
agaaaaagctccgcagtgggaaacccgggtcaatacaagcccatgattctggatgataaa
tcccgggtctatctttaccgttactgggaatatcaggataaactcgcggctctgattaaa
acacgaaccacagaacaggccgaagatattgacatggcagtgctgaaaaaggggctggaa
cggctttttcccgcaaatcagacagatgaaactgactggcagaaggtcgctgcatttacc
gcactgatgaaaaatttctgtgttatttcaggaggcccgggaaccggtaagaccacaacg
gttacgaaaatactggccttggtattggaacagaaccgcaagcagagcattgcccttgca
gctcccactgggaaagcggccgcgaggttgcaggaatccattcttcgtgagaaaaataaa
aagccttatgagggagtcagagaggcaattccggaggatgcgtcaaccatacaccggctc
ctcgggagtgttcccggatcgccttattttcgtcataatgccggcaatccgttatctgcg
gatgttgtcgtgatagacgaagcctccatggtggacatggccctgatgtccaaacttgtc
cagtcgctttccccccggacgcggctgattcttctgggggataaagatcagttggcttcg
gtggaggcgggggccgtgcttggggatatctgtgacacgggaaatattcacagcttctct
gaaaaattctgcgaggacttcaggcaaattaccggacatgcaattcgtgttccttcagat
gataatgcagaacctgccacacctcgtcggaaccgctcggagatgagtaactccgttgtt
caattgcataagagctatcgctttgataaaaatagcggtatcggtgcggtcagtcatgcg
gtgaattcaggagatgcggaagctgcgttaacccatatgaaaaagggggaatacggcgat
atttgctggaaaacacttccgcggcccgatgcgttgccccgggatataaaagatacggtc
attcagggatttcagagttatttaaaggcgattgatgatcccttgaaaatgtttgaattg
tttgaccggtttcggattctgtgcgcgatcagacaggggcgttacggtgttgctgccgtg
aatatttatgtggagtggattctcagacaagccaatctcatacagccatacagaacgtgg
tataaagggcgtccggtgatgattacccgaaatgattatcatctccggttgttcaatggc
gatatcggaatcaccctgcctgatgcggacgcgaacggtgaagcaaaggttttttttcct
gacactgagggaacgctcagaaaattacatccgttcagactgcctgaacatgaaaccgta
tacgccatgactgtgcataaaagccagggatcagaatttgacaaggtcctgctgctcctt
ccgaacaaagattctccggtattgacaagggaacttatttacacggggattacccgtgcc
aaggagaatgccgaggtatggggaaccgagcgtgtttttcgtgacgctgtttcgcgccgt
attgagcgggcctcaggcctgcgtgatgctttgtgggagacatag

DBGET integrated database retrieval system