Desulfonema magnum: dnm_023080
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Entry
dnm_023080 CDS
T07102
Name
(GenBank) AMP-dependent synthetase/ligase family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dmm
Desulfonema magnum
Pathway
dmm00061
Fatty acid biosynthesis
dmm00071
Fatty acid degradation
dmm01100
Metabolic pathways
dmm01212
Fatty acid metabolism
dmm02024
Quorum sensing
dmm04146
Peroxisome
Module
dmm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dmm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
dnm_023080
00071 Fatty acid degradation
dnm_023080
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
dnm_023080
09145 Cellular community - prokaryotes
02024 Quorum sensing
dnm_023080
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dmm01004
]
dnm_023080
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmm04147
]
dnm_023080
Enzymes [BR:
dmm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
dnm_023080
Lipid biosynthesis proteins [BR:
dmm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
dnm_023080
Exosome [BR:
dmm04147
]
Exosomal proteins
Exosomal proteins of breast milk
dnm_023080
Exosomal proteins of breast cancer cells
dnm_023080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
AMP-dom_DIP2-like
Motif
Other DBs
NCBI-ProteinID:
QTA86287
UniProt:
A0A975BIS3
LinkDB
All DBs
Position
complement(1761582..1763036)
Genome browser
AA seq
484 aa
AA seq
DB search
MKLNLAECFFQKAEQQADHPLILGPGAEDRTSYSEFREEIRLLAKRLRDAGVGRGSNIGL
HYRGGRDYIAFVYAIWNCGACVTPLPLELTVPEKRQIFQHIHMDGVISGANILDQIRASV
RPAILSLTRQAVFAKVDTVCEAPSHLADINPAFIRFTSGTTGDAKGVVLSHRSIYERIHA
ANQVLQISENDRILWLLSMDYHFAVSIVAYLMFGAGIILPKNSFGVTLLTAASDHRATFI
YGSPIHYSLMTQDDTGALLPPELRLAIVTTTALRSEIADAFYKRFGRILNETYGIIELGL
PAINVSHLKEKQGSVGRMVPGYELRLDCLQGQEQGEITIRGKGVLDAYYFPWQSRDAILR
QNDGWFRTGDIGRLDADGFLYIVGRIKEMISIGGLKFFPEEVESVLENHPAIHAACVFAV
QERQWGMSAMAYLVLAEGRATPDDNELIAYCKKYLTRHKIPGRFQWVDHLTYTASGKKNR
NPEK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaatctggcagaatgcttttttcaaaaagcggaacaacaagctgatcatccg
ctcatattgggtccgggtgcagaggaccggacaagttattccgaatttcgtgaagagatt
cgattgctggcaaaacgactcagagatgcgggggttggcaggggtagcaatattgggttg
cattatcggggcggacgtgattatattgcctttgtatatgccatttggaactgcggtgca
tgtgtcacaccgttgccgcttgagttgacggtcccggaaaaacgacaaatattccaacat
atccatatggatggtgtcatatccggtgcaaatattctggatcagatcagagcgtctgtc
cgaccggccatcttatccctcacgcgtcaagctgtctttgccaaggttgatacagtctgc
gaagcaccttcccacttggctgacatcaaccctgcgtttatccgctttacgtctggcaca
actggtgatgcaaagggcgtggttttatctcataggtccatttatgaacgtatccatgcg
gccaatcaagtcttacagatcagtgaaaatgatcgtatcctgtggttgctgtccatggac
taccattttgcggtctccatagtagcctatctgatgttcggtgccggcatcattctgcca
aaaaacagtttcggcgtaacgttgctcacagcggcttcggaccacagggctacgtttata
tatggttctccgatccattatagcctgatgactcaggatgacaccggcgcacttttacca
cctgaattgcgccttgcaatcgtaactactacagccctgcgttcagaaatcgccgatgct
ttctataaacgatttgggcgtatcctcaatgaaacctacggcatcatcgaacttggcctg
cctgcaattaatgtgagccatttgaaagaaaaacagggttctgtcggcaggatggtgcct
ggctatgagctgcggcttgactgtctacagggccaagagcagggagaaatcaccatcagg
ggaaaaggggtgttggatgcgtattatttcccttggcaatcccgtgatgccatcctccgg
caaaatgacggttggttcagaacgggagacatcggcagactggatgcggatggatttctt
tatattgtcggccgtatcaaagaaatgatcagtatcggcggtctgaaattttttccggaa
gaggtggaatccgtgttggagaaccatcctgctatccatgcagcctgtgtgttcgctgtt
caggaaaggcaatggggaatgtcagctatggcatatctggtgctggccgaagggagagct
acgccagatgataacgagttaatcgcttactgtaagaaatatctgacccgtcacaaaata
cccgggcggttccaatgggttgaccatttgacctacactgcaagcggaaaaaagaaccgc
aacccggaaaaatga
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