Desulfonema magnum: dnm_024670
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Entry
dnm_024670 CDS
T07102
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
dmm
Desulfonema magnum
Pathway
dmm00541
Biosynthesis of various nucleotide sugars
dmm01100
Metabolic pathways
dmm01250
Biosynthesis of nucleotide sugars
Module
dmm_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
dmm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
dnm_024670 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dmm01005
]
dnm_024670 (kdsA)
Enzymes [BR:
dmm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
dnm_024670 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
dmm01005
]
Lipid A
dnm_024670 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
QTA86443
UniProt:
A0A975GN27
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Position
1874185..1875003
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AA seq
272 aa
AA seq
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MSNIVKIENISIGHGFPLVLISGPCVIEDYETTYEIASFLKDLTQKLEIPFIFKASYDKA
NRTSIRSYRGPGTEAGLEILYRIRTELDVKILSDVHRINEIDAAAKVLDIIQIPAFLCRQ
TDFILAVAKTGKPVNIKKGQFLAPWDMINVVEKVTSTGNKRILVTDRGTMFGYNNLIADF
RGIKIMQDATEYPVIFDATHSVQLPGGSGTRSGGQREFAPILARAAVASGADGIFLEVHK
EPDKALCDGPNSLRLDMLHELFSQLKAIKEVL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatattgttaaaatagaaaacatttcgattgggcatggttttccccttgttctg
atatcaggtccgtgtgtgatagaagattatgaaacgacctatgaaatcgcctcatttctc
aaagaccttacccaaaaactggaaatcccctttattttcaaggcatcctatgacaaagcc
aatcggacatccatccgctcttacaggggacccgggacagaggccgggcttgaaattctt
tatcgtatcaggacagaacttgatgtcaagatactttcagatgttcacagaataaatgag
attgacgcggccgccaaagtgctggacatcatccagattcctgcttttttatgccggcag
acagattttattttagctgttgcaaaaacagggaaacctgttaatattaaaaaaggtcag
tttctcgcgccgtgggatatgataaatgtggtggaaaaagtgacttccacaggaaacaag
cggattctggtcacggacagaggaacaatgttcggatacaataatctgatcgcagatttc
cgcggtataaaaatcatgcaggatgcaacagaatacccggtcatatttgacgcgacacac
agtgtccagcttcccggagggtccgggacccgttccggcgggcagcgggaatttgccccg
attcttgccagagcggcagttgcctcaggcgcggacggtatttttttggaagttcacaaa
gaacctgacaaggccctttgtgacggacccaattcattaaggctggatatgcttcatgaa
ttattttcccagctgaaagccattaaagaggtgctatga
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