Desulfonema magnum: dnm_049980
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Entry
dnm_049980 CDS
T07102
Symbol
recC
Name
(GenBank) Exodeoxyribonuclease V, subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
dmm
Desulfonema magnum
Pathway
dmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
dnm_049980 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmm03400
]
dnm_049980 (recC)
Enzymes [BR:
dmm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
dnm_049980 (recC)
DNA repair and recombination proteins [BR:
dmm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
dnm_049980 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QTA88951
UniProt:
A0A975BNU3
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Position
3935957..3939262
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AA seq
1101 aa
AA seq
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MKQFRLFTGNRVEILAELLANVLKTPLKSALDKEVIVVQSKGMARWISMELARYHGVCAN
ISFRFPNDFIYENFQNILSGLPETSPCDPEIMTWKLMKLLMTCTTKPEFEILENYLEGNG
ESLRRFQLSERIADIYDQYLIFRPDMISKWEQGKENHWQAMLWRELIRGDEGMHRAGLRN
AFFEVLENALKFGNHKLKFPERISVFGISGLPRFHIEVLDAISWFTEVNFFLMNPCGYYW
GDILSKGQIKRLAAKDSLYDTDSEALHIEQGNSLLASMGTLGRDFFDLMNEFVSEEYPYF
EEPGENTLLSCIQSDIVNLRERGSESKIKDNDFENDTSIQIHSCHSPMREIEVLHDRLLQ
MFESDPTLRPRDILVMTPDIEIYSPYIQAVFDLPADDSKRIPFSIADRSIRTESRIIDTF
MTMLDLTNGRFGAAQIFSVLESPAVCRKFSLSDADLDIIRRWVQDTRIRWGIDSENRRKL
GLPDMPENTWKTGLDRLVLGYAMPGGEEKMFSDILPYDFIEGNEASLLGKFLEFTKRLFF
HVEFLEKRQTLTEWSDTLKKILDAFFEPDENTEDEAQKIRTRLNQLAEAENEADFNEKID
INVIRCYLRNYFKKEPSRFGFIAGGVTFCAMLPMRSIPFRVICLTGMNSDAYPRQSESTG
FDLMAKNIRPGDPSRRNDDRYLFLESVLSAREKLYISYVGQNIRDNSVAPPSVLVSELMD
YIEKGFEIPDKKILKDHILIIHRLQAFSPEYFRNSELGTRNLKLGRLFSYSEENLEAARC
LLKNRKTPAPFISKCLSDPETEWKTINLSALCRFFNNPAKFLLNKRLHIYLDQKDSVLME
KESFDLNGLDKYFLGRDLVEKKLDTREPEQFFALKKASGQLPHGTVGTCIYDRISQETDQ
FVKKIQPYIQGTALKPLEVDLSLNGFRLNGKIDAIYPERLVHYRYAKVKSSDRIKTWIHH
LVLNCRNGSGYGADSKYPRFSMLAGSDSMWKYEPLENSEAILETLLEKYWEGLKKPLHFF
PKTSWEYADMILGKSKSSEAALQKAQNAWTGGDWSSGEIEEDFYFQLCFEHANPLDSEFQ
KTALEIFEPLINVQEEVSSVE
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattcagactttttaccgggaaccgcgtggaaattcttgcggagttattggcc
aatgttctgaagacaccgctaaaatccgcgctggataaggaagttattgttgttcagagc
aaaggcatggcacgctggatatccatggagcttgcccgttatcatggtgtctgcgcaaac
atcagcttccgctttcccaatgattttatttatgaaaattttcaaaacatcttgtcagga
cttcctgaaacatcgccctgtgatcctgaaataatgacttggaagctcatgaagcttctt
atgacctgcaccacgaagccggagtttgaaattcttgaaaactacctggaaggaaacgga
gaatcgctcaggcggttccagctttcggagcgcattgcagatatttatgatcaatacctg
atttttcgtcctgatatgatttccaaatgggagcagggcaaagaaaatcactggcaggcg
atgctttggagagaactgatcaggggcgatgaagggatgcaccgtgcaggattaagaaac
gctttttttgaagtgcttgaaaacgcacttaaatttggaaatcataaactgaaatttccg
gagaggatttcagtctttggcatatccggtctgccgcgatttcatattgaggtgcttgac
gcgatatcctggttcaccgaggtgaattttttcctcatgaatccgtgcggatactattgg
ggagatatcctttcaaaaggacaaattaaaagacttgctgccaaagacagcctgtatgat
actgacagcgaagccctccatattgagcagggaaacagcctcctggcctctatgggaacg
ctgggaagagacttttttgatctgatgaatgaattcgtcagcgaggaatatccgtatttt
gaagaacctggtgaaaacacgctgctttcgtgcatccagtccgacattgtgaatctcagg
gagcgaggctcggaatcaaagataaaagacaacgattttgaaaatgacacttcaattcag
attcattcgtgtcacagtcccatgcgggaaatcgaggtcctgcatgacagactccttcag
atgtttgaaagcgatccgaccctgaggccccgggatattctggtaatgacgccggatatt
gaaatctattcgccttatattcaggcggtgtttgatttgcccgcggatgattccaagaga
attcctttcagtattgcggatcggagtattcgcacggagagccgtataattgacacattt
atgacgatgcttgatcttacgaacggaagattcggggcggctcagatattctcggttctc
gaatctccggccgtgtgtcggaaattcagtttgtcggacgcggaccttgatatcattcgg
agatgggtccaggacacacgaatccgatggggaattgacagcgagaatcgcaggaaactg
ggattgccggatatgcctgaaaacacatggaaaacaggtctggacaggctggttttagga
tatgccatgcccgggggagaagagaaaatgttctcagacattctcccttatgattttatt
gagggaaatgaagcgtctcttcttggaaaatttcttgaatttacaaagcggctttttttt
catgttgaatttttggaaaaacgccaaactcttacggaatggtctgatacgctgaaaaaa
attcttgacgcattcttcgagccagatgaaaatacagaagatgaggctcagaaaatacga
acccgcctgaaccaactggccgaggccgagaatgaagcggattttaatgaaaagattgat
ataaatgtcatcagatgctatctgagaaattattttaaaaaagagccttccagattcgga
tttattgccgggggggtgacattttgcgccatgcttcccatgcggagtattcctttcagg
gtcatctgtcttacgggcatgaactctgatgcttatcccagacagtcagagtcaactggg
tttgatctcatggcaaaaaacatcaggcccggggatccgtcacgccggaatgacgaccgg
tatctttttctggagtctgttttatcagccagagaaaaactctatatcagctatgtggga
caaaatattcgggataacagcgttgctccgccatcggtgctggtgagcgaactcatggat
tacattgaaaagggctttgaaatcccggataaaaaaatactcaaagatcatattcttata
atacatcgtctccaggcattcagccctgaatattttcggaactcggaactcggaactcgg
aacttgaaattgggacggctgttcagctattctgaggaaaatcttgaagcggcacggtgt
ctcctgaaaaatcggaaaacacctgctccgtttatttccaaatgtctttccgatcctgaa
actgaatggaaaaccattaacttgtcagcgctttgccggttttttaataatcctgcgaaa
tttttgctcaataagcgtcttcacatttatcttgatcagaaggattctgttctcatggaa
aaagaatcttttgatctcaatggattggataagtattttcttgggcgggatttggtggaa
aagaaacttgacacccgagaacctgaacaattttttgccttaaaaaaagcttcgggacag
ttgccccacggaactgtaggtacctgcatttatgacagaatcagtcaggagacagaccag
tttgtaaaaaaaatacagccatatatacagggaacagctttgaagcctttggaagtggat
ctgagtttaaatggtttcagactgaacggaaaaattgatgcgatttatcctgaaagactg
gttcattatcgttatgcaaaagtaaagtcctcagatcgtatcaaaacatggattcatcac
ctggttctgaattgcaggaacggttcaggttacggggctgacagcaaatatccccggttc
agtatgcttgcaggttcggattcaatgtggaaatatgagccactggaaaacagcgaagcg
attcttgaaaccctcttggaaaaatactgggaagggctgaaaaaacctcttcattttttt
ccaaagacctcttgggaatatgcggatatgattctcggaaaaagtaagtcctctgaagct
gcgttgcaaaaagcacaaaatgcctggacaggaggcgattggagttccggtgaaattgaa
gaagatttctattttcagctttgttttgaacacgcaaacccccttgactcagaatttcag
aaaactgcattggaaatttttgaaccgcttataaatgttcaggaagaggtatcgtctgtt
gaatga
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