Desulfonema magnum: dnm_049990
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Entry
dnm_049990 CDS
T07102
Name
(GenBank) ATP-dependent DNA helicase RecD domain-containing protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dmm
Desulfonema magnum
Pathway
dmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
dnm_049990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmm03400
]
dnm_049990
Enzymes [BR:
dmm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
dnm_049990
DNA repair and recombination proteins [BR:
dmm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
dnm_049990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
NAT10_TcmA_helicase
SLFN-g3_helicase
PIF1
AAA_28
DEAD
PhoH
UvrD-helicase
nSTAND3
RsgA_GTPase
T2SSE
AAA_22
AAA_29
SRP54
AAA
ABC_tran
AAA_16
TrwB_AAD_bind
NTPase_1
Mg_chelatase
NB-ARC
AAA_23
cobW
NPHP3_N
AAA_5
ABC_ATPase
Herpes_Helicase
AAA_7
YqzN_YkzM
AAA_15
MMR_HSR1
SMC_N
TsaE
Motif
Other DBs
NCBI-ProteinID:
QTA88953
UniProt:
A0A975BPG6
LinkDB
All DBs
Position
3939665..3941836
Genome browser
AA seq
723 aa
AA seq
DB search
MLTDLQGQIERITYTNEENGYTIARLKVYGHRDLVTVVGNLMAPNPGEILKMKGEWTSHP
KYGEQFKIVYYDTAVPATVYGIRKYLGSGLIKGVGPIIAERIVNKFGEETLDIIEDDIGN
LAKVEGIGKKRIAMIQKAWDDQKEIREVMVFLQSHGVSSGYATKIFKQYGNESVAVVREN
PYRLAMDIFGIGFITADRIAEQLGFAKDSPLRAEAGVLYVLHQLSDEGHVYYPYEPLIEK
SREILEVDREIVANALATGVVEKKIVIEDLNEDLEEFRINNKAIYLAKFHTCETGIARRL
KLLVNAPKSVREVDSEKAAEWVQKQLAIQLAEKQAEAIQCAIESKVMVITGGPGTGKTTI
INAILKIFSKLNVRIMLAAPTGRAAKRMTETTGYQAKTIHRMLEYSIAKGGFQKDHEKPL
NCDLLIVDEASMIDTVLMHHLLKAIPPRATFILVGDVNQLPSVGAGNVLNDIIASDVAPV
VELNEIFRQARESQIVMNAHKINNGRIPYFDPNLPRTDFYFIQKEDPEKVLDIIMRLVKE
RIPGRFGFDPVDDIQVLTPMHKGIVGAANLNMQLQRTLNPGENGVVRGDRNYRVNDKVMQ
IRNNYDKEVFNGDIGRIIRIDSEEKEVIIVFDRREVTYDFTDLDEIVLAYAVSVHKSQGS
EYPAVVIPILTQHFILLQRNLIYTAVTRGRELVVMVGTKKALAIGVKNNKTQKRFTYLKH
RLR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgctgactgaccttcaaggacagatcgaacgtattacatacaccaacgaagaaaacggc
tataccattgccagactgaaggtctatgggcaccgggatttggtgaccgtggtgggaaac
ctgatggctcccaaccccggagaaatcctcaaaatgaaaggcgaatggaccagccatccc
aaatatggcgagcagttcaaaattgtttactatgacactgctgttccggccacggtttat
ggcatccgaaaatatcttggctccggtctgatcaaaggagtaggccccatcattgcggag
cgcatcgtcaataagttcggagaagaaacacttgatatcatagaagatgacatcggaaat
ctggccaaggtcgaaggcattggaaagaaacgcatcgccatgatccaaaaagcatgggat
gatcagaaagagattcgggaggtcatggtctttctgcaaagccacggtgtcagttcaggc
tatgccacgaagatattcaagcaatacggaaacgagtccgttgcagtggtgagagaaaat
ccctaccgcctggcaatggacatcttcggaatcggctttatcaccgcggatcgtattgcc
gaacagttggggtttgccaaagattccccgttacgggccgaagccggggtgctttatgtt
ctccatcagctttcagatgaggggcatgtctattatccgtatgagccgcttatagaaaaa
agcagggaaatccttgaggttgacagggagattgttgccaatgcccttgccaccggcgtt
gttgagaaaaaaatcgtgatcgaggatctgaatgaggaccttgaggaattcaggataaac
aacaaggcgatttatctggcaaagttccacacctgtgagaccggtattgccagacgatta
aagctgctggtaaacgctcccaagtccgttcgtgaggtggattcggaaaaggcggctgag
tgggtgcaaaaacaactggcaattcagttggcggaaaagcaggccgaggccatacaatgc
gcgattgaaagcaaagtcatggttatcaccggaggtcccggaacaggtaaaaccaccatt
atcaatgccatattgaaaattttttccaaactgaacgtaaggatcatgctggccgcgccc
acgggcagggcagcaaaacgcatgaccgaaaccacggggtatcaggcaaaaaccattcac
cggatgcttgaatacagcattgcaaaaggcggttttcagaaagatcatgaaaaaccctta
aattgcgatctgctgattgtggatgaggcctccatgattgacactgtcctgatgcatcat
ctgctgaaagccattccgccccgggccacatttattctcgtgggagatgtgaaccagctg
ccttctgtgggcgcgggaaatgttctcaatgacattattgcttcggatgtcgcacctgtg
gtggagttaaacgagatattccgtcaggccagggaaagccagattgtcatgaatgctcac
aagatcaataatggcaggattccgtattttgacccgaatttacctaggactgatttttat
tttattcagaaagaagaccctgaaaaagtcctggatattatcatgagactggtaaaggag
cgaatccccggccgctttgggtttgatccggttgacgatatacaagtccttacgcccatg
cacaaaggcattgtgggcgcggcaaatctgaatatgcaattgcagcggacgctcaatccc
ggagaaaatggcgtggtgcggggggatcggaactatcgggtcaatgacaaggtgatgcag
atcaggaacaattatgacaaagaagtttttaacggggatatcgggagaatcatccgcatt
gactcagaggagaaagaagtcattatcgtgtttgaccgcagagaagtcacttatgatttt
acagacctggatgagattgttctggcttatgcggtttctgtgcataaatcccagggatcc
gaatatccggcggtggtgatccccatcctcacccagcattttatcctcttgcagcgtaat
ctgatttacacggcagtgaccaggggacgggagctggtggtcatggtgggaaccaaaaaa
gcgttggcaatcggcgtgaaaaataataagacccagaaacggtttacttatctgaaacat
cgcctgcgctga
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