Desulfonema magnum: dnm_052390
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Entry
dnm_052390 CDS
T07102
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dmm
Desulfonema magnum
Brite
KEGG Orthology (KO) [BR:
dmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmm03032
]
dnm_052390 (topA)
03400 DNA repair and recombination proteins [BR:
dmm03400
]
dnm_052390 (topA)
Enzymes [BR:
dmm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
dnm_052390 (topA)
DNA replication proteins [BR:
dmm03032
]
Prokaryotic type
DNA Topoisomerases
dnm_052390 (topA)
DNA repair and recombination proteins [BR:
dmm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
dnm_052390 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
PSV_ORF131-like_dom
Toprim_2
Calci_bind_CcbP
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
QTA89189
UniProt:
A0A975GPU6
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Position
4136454..4138718
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AA seq
754 aa
AA seq
DB search
MSKPLVIVESPTKIKTLQKYLGKDYNVAATVGHIKDLPAKEMGIDIEDHFKPKYKTISGK
QKIITSLKKAAGEATDIYLAPDPDREGEAIAWHAAEILKKKERKFHRVLFHELTKKAIHE
AMASPQELHRNKYEAQQARRILDRLVGYQISPLLWRKVKRGLSAGRVQSVAVRIICERER
EIHAFESEEYWSVTAYLEGDVPPPFMAKLTKKQGKKIHIPNEAEVMKILNELSAEKLLVE
KVIKKTTKRNPLPPFITSKLQQEAIRKLRFSAKKTMIVAQQLYEGIEIEGGEPVGLITYM
RTDSTRIAQEAAEEALGLIRERFGEEYAIQKPRFFKNRKKVQDAHEAIRPTSVFNTPEKL
ASYLSKDQLSLYTLIWQRFVASQMKQALINNNSVTVKAGSYLFNASGSTIKFPGFMALYM
SSDEENEDKSKILPELSQGMELKLNKFDPKQHFTMPRPRFSEASLVKELEENGIGRPSTY
ATILSTIREKGYVEFVKGSFRPTELGFIVNDLIVESFPDVFNVDFTAKMEDDLDRIEAAE
VDSLKVLNGFYTPFKKELDMASETMLSMKGVGFATDIDCPECGKKLHVKVGKNGHFLACS
GYPDCKYSNDYTRDEKGRIRPVEISHEEVGDKVCEKCGKPMVVKRGKYGTFLACSGYPDC
KHTQSTDSNNGGQATGIKCPNEGCDGELVQRRSKRGKVFYGCSRYPDCTFAIWDKPVDEA
CPACGASFLVEKSSKKEGTFLACLNKDCGFKKSA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaccgcttgttattgtagaatcaccgacaaaaataaaaacccttcagaaatat
ctcggcaaagattacaatgtggctgccacggtgggccacatcaaagaccttcctgcaaaa
gaaatgggaattgatatcgaagatcatttcaagccgaaatacaagacgatttccggcaag
cagaagattatcacatctttgaaaaaagccgcaggtgaagccacggacatctatcttgct
cctgacccggacagggagggagaggcgattgcatggcatgcggccgaaattttaaagaaa
aaagaacgcaaatttcacagggtgctgtttcatgaactcacaaagaaggccattcacgag
gcaatggcttccccccaggaacttcaccggaacaaatacgaggcccagcaggcccggagg
attctggacagactggtggggtatcagatttccccgttgctgtggcgcaaggtgaaaaga
ggactgagcgcgggccgggtgcagtcggttgcggtccgaattatctgtgaaagggagcgg
gagatacatgcgtttgagtcagaggaatactggtctgtcactgcgtatcttgagggcgat
gttccgcctccgtttatggcaaagctgacaaaaaaacagggaaaaaagattcatattccc
aatgaagccgaagtcatgaagattttaaatgagttgtccgcggaaaaattacttgtggaa
aaagtgattaaaaagaccacaaaacgaaatccgcttcctccgtttatcacgagcaaactc
cagcaggaagccatccgaaagctcaggttttccgccaaaaaaaccatgattgtggcccag
cagctttatgagggaattgagattgaagggggcgagcctgtggggctgatcacctacatg
cgtacggattccacccgaattgcccaggaagctgccgaagaagcccttgggctgatccgg
gagcggtttggtgaggagtatgccattcagaagccgagatttttcaaaaatcgcaaaaaa
gttcaggatgcccatgaggccatacgtcccacatcggtttttaatactcctgaaaaactc
gcgtcctatctttccaaagaccagctcagtttatacacccttatctggcagcggtttgtc
gcgtcccagatgaaacaggcgctgattaacaataattctgtaactgtcaaggctggttcc
tatttgttcaacgcaagcggttccacgataaaatttcccggttttatggcactttatatg
tcttcggatgaagaaaatgaggataagtcaaaaattcttcccgaactttcccagggcatg
gaactgaagctgaacaaatttgacccgaaacagcattttaccatgccaagacccaggttt
tcggaggcctcgttggtgaaggagcttgaagaaaacggcattggcagacccagcacctat
gcgacaattttatccaccataagggaaaaaggatatgtggagtttgtcaaagggtctttc
aggcccactgaactggggtttattgtaaatgatctgatcgtggaaagctttccggatgtg
tttaatgttgattttactgccaaaatggaggatgatctggatcgtatcgaagccgcggag
gtggattctttaaaggttctgaacgggttttacacgccttttaagaaagagctggatatg
gcttcggagaccatgctgagtatgaaaggcgtcgggtttgccacagatattgactgcccc
gaatgcggtaaaaagcttcatgtcaaggtcggtaaaaacggacattttcttgcgtgcagc
ggatatccggattgtaagtacagcaacgattatacccgggacgaaaaagggcggatccgg
cctgttgagatatcccatgaagaggtcggggataaggtttgtgaaaaatgcggaaagccc
atggtggtgaaacgtgggaaatatggcacgtttcttgcctgtagcggctacccggactgt
aaacatacgcagtccacagactcaaacaacgggggacaggcaacaggaatcaagtgtccg
aatgagggctgtgacggggaactggttcagcgaagatccaaacgggggaaagtcttttat
ggttgcagccgttatccggattgcacttttgccatatgggacaaacccgtggatgaggca
tgtccggcctgcggcgcgagctttctggttgaaaagtcttccaaaaaggaagggacgttt
ctggcctgcctgaataaagactgcgggtttaagaaaagtgcataa
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