Desulfonema magnum: dnm_059070
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Entry
dnm_059070 CDS
T07102
Name
(GenBank) Putative pyruvate carboxylase subunit B, PycB-like
KO
K01960
pyruvate carboxylase subunit B [EC:
6.4.1.1
]
Organism
dmm
Desulfonema magnum
Pathway
dmm00020
Citrate cycle (TCA cycle)
dmm00620
Pyruvate metabolism
dmm00720
Other carbon fixation pathways
dmm01100
Metabolic pathways
dmm01120
Microbial metabolism in diverse environments
dmm01200
Carbon metabolism
dmm01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
dmm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
dnm_059070
00620 Pyruvate metabolism
dnm_059070
09102 Energy metabolism
00720 Other carbon fixation pathways
dnm_059070
Enzymes [BR:
dmm01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
dnm_059070
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Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
Biotin_lipoyl
HMGL-like
Biotin_lipoyl_2
GCV_H
TGT
Motif
Other DBs
NCBI-ProteinID:
QTA89850
UniProt:
A0A975GQF6
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All DBs
Position
complement(4690131..4692200)
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AA seq
689 aa
AA seq
DB search
MSDHTQVKITEMNYANDRPKAENPVKIEDLSLRDGHQSLFATRGRTEDMIPVAEMMDEVG
FWAVETWGGATFDTMHRFLNEDPWERIRTLKRYIKKTPFSMLLRGQNLVGYRNYADDVAR
AFVERAAENGMDIFRTFDALNDYRNFETVVPVIKECGKHFQGCICYTMTEPRMGGEVYNL
DYYVNKAKALEAMGADSICIKDMAGLIAPYDAYAVVKALKENVKAPIHLHSHFTSGMSPM
SHLKAIEAGVDIIDTCMSPYAYRTSHAAIEPLVMSLVGTNRDTGFDIQLLAKINETLEKE
VMPKYRHLLDDSKMSVIDINVLLHQTPGGMLSNLVNQLREMDALDKIDQVYAELPRVRKE
LGQIPLVTPTSQIVGIQTVNNVLFDDKNERYKMITAQVKDLCYGLYGKTAVPIDPEVQKK
ALKGYPRGEEPITCRPAEVLEPELEKAKEDVKGLAADLDDTIIYALYPVTGKKFLKWKYG
KEDVPEEVKPRSLEQALAEQELLKKALAGELVEKGEKEAPAKGENLRKFNVFVDDEYFEV
GVEEVDGTPLVSYIQQLQAQMPAQMPVAPLAAPVMPVAAPAAPAAPAAPAAPAAPAAPAA
PAATPEPAAAPAAAEAPTDGTPLKAPMPGMIVRYEKEEGDSVNEGETVVVLEAMKMENAL
PASVSGTIKSINFKSGDSVAKNDILCVIG
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcatacacaagtaaaaataactgagatgaattacgccaacgacagaccaaag
gcggaaaatcctgttaagatagaagacctgagccttcgtgacggccatcagtcccttttt
gccacaagagggcgcaccgaagatatgattcctgtggctgaaatgatggacgaagtcggg
ttctgggcagtggaaacttggggcggcgcgacgttcgataccatgcaccgctttctgaat
gaggatccgtgggaaaggattcggacgttaaaacgatatatcaaaaaaacaccgttttcc
atgcttctcaggggacagaacctggtgggatatcggaactacgcggatgacgtggcccgg
gcctttgtggaaagagcggccgaaaacggcatggacatcttccgaacatttgacgcgtta
aacgactaccgcaactttgagacggtcgttccggtcatcaaagaatgcggaaaacatttt
cagggttgtatctgttacaccatgacagaacccagaatgggcggagaggtttacaacctg
gattactatgtcaataaggcaaaagctctggaagcaatgggcgctgacagtatctgtatc
aaggatatggccggcctgattgcgccttatgacgcgtatgccgttgtcaaggctttgaag
gagaatgtgaaggcaccgattcatcttcacagtcattttacctccggtatgtctcccatg
tctcatctgaaggccattgaggccggtgtggacattattgacacctgcatgtctccttat
gcatatcgtacctcacatgccgcgattgaaccgctggtgatgtcgctggtcgggacaaac
agagacacgggttttgatattcagcttctggcaaagattaatgagacacttgaaaaagaa
gtgatgcccaaatacagacatctgctggatgactcaaagatgtctgtcattgatatcaat
gtgcttctgcatcagaccccgggcggcatgctttccaacctggtcaaccagctgagagaa
atggacgcactggacaaaattgatcaggtatatgcggagcttcccagggtaaggaaagaa
ctcggccagattccgctggtgacacctacaagccagattgtaggcattcagaccgtcaac
aatgttctctttgatgacaaaaatgagcgttacaagatgattaccgctcaggtaaaagat
ttgtgctacgggctgtatggaaagactgctgttcccattgaccccgaagttcagaaaaaa
gccctcaagggttatcccagaggcgaagaacccattacatgcaggccggccgaggttctg
gaacctgagcttgaaaaagccaaggaagatgtcaaggggctcgcggcagacttggatgat
actattatttacgcgctttatccggttaccggcaaaaagtttttgaaatggaaatacggt
aaagaggatgtgcctgaggaagtaaaaccgagatctctggaacaggcacttgccgagcag
gaactgcttaaaaaagccctggccggagagcttgttgaaaagggtgaaaaagaagcccct
gccaaaggtgagaatctccgtaaatttaatgtatttgttgatgatgaatattttgaggtg
ggtgttgaggaagtggacggaacgccgttggtcagctacatccagcaattacaggctcag
atgccagcgcagatgccagttgcaccgcttgctgctccggttatgccagttgctgcgcct
gctgcgcctgctgcgcctgctgcgcctgccgcaccggccgcaccggccgcaccggccgca
ccggccgctacacccgaacccgcggccgcacccgcggcagcagaagcgcctacggatggc
actccgcttaaagcgcctatgcccggcatgatcgtccgatatgaaaaagaagagggcgat
tctgtaaacgaaggcgaaaccgtggtggttctggaagccatgaagatggaaaatgcgctt
ccggcttctgtaagcggcacaattaagtccattaatttcaagagcggcgattccgtagcc
aaaaatgatatactttgtgtgatcggatag
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