Desulfonema magnum: dnm_069160
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Entry
dnm_069160 CDS
T07102
Name
(GenBank) Thrombospondin type 3 repeat-containing protein
Organism
dmm
Desulfonema magnum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4114
CarboxypepD_reg
TSP_3
G8
CooC_C
TSP3_bac
CarbopepD_reg_2
Ig_VWA7
Big_1
Motif
Other DBs
NCBI-ProteinID:
QTA90854
UniProt:
A0A975GRC9
LinkDB
All DBs
Position
complement(5502053..5507206)
Genome browser
AA seq
1717 aa
AA seq
DB search
MNTKKNFFSFGSWSILAVCLYVMALVMGAGFASPASALDCPAGYVEMSGKVTTGAGTGIE
GVELRGLPGNPETDANGHYETCLPKGWTGTVKPTYEIGMNPVTYDVSLNKPGPFRRDLSY
SNLVRPIYFTFKTTLMPLGDAVLKIYATGDLDGSNSNEDISVYAETPDGDLLEVIYDNER
PGTIQEITIPKDILAGYAEDGEVVIVLATGGGAAYVSNVWVHLTYTGSPLKYKFSPPSKR
YTDIQADLTNQNYSDTKTYKISGHIRDKDGNALQKVTLVGLNVMTDSDGFYTANVPSGWS
GTVRPNLSAGGITFSFKPPQIPYTNVDSDFMEQNYTSGLPLLTIQGYVKDRSGNGVPGVT
IEVEDIYAGTKDTTLTTDWRGFYKVKVENQASVNLTPKKPGYTFNIEYAPFKDVYENTDF
DFRAKTSLNTDCSVSSTKNQSKEGGGNWSNPYTWSKGHVPTSNEEVQINAEDVVIFDISS
ASVKTLCNFGTLQGVAGSNLAIVATDFILNSGEIIGANGASNGQKGSDVTLAAMNVHNSG
IIQAGNGANDSGYHAQGGQGGTIMLTGDNITNEGSIIGGNGGDGRGGHGGSAYGGHGGFA
MIMAKKIAKNNRGASITSGIGGGAYASGDRHCRGHWFWKRCWYTGGYYRAGDTGNTTFSG
LIAMNRGSVKGKDVIFDPSSLEIIGEDAEVIAENDIVITGGADTTVYLADLIDGSISAPG
NITIELGPGSTLDMRGLTAKAIQADGNIEIYADKIITNDGEVTDVNELVNSGLIEAGGEV
THEEGKIRYEVIVAGSGQVNAEAGETVNIEFSVVNHSSVDDTYTLTKTDTQSWTLGALDS
SVSLASLETKKFSMAVNLPSEKGVEDTITITARSVKHPETVGTLEIRISTNLIIAEEDTT
DADEDGLIKFEEDKLGTDPENADTDGDGMDDWWEANYKLNPLSDDSADDKDADGFTNIQE
YESGSDPTVGDSDGDGINDGSDNCPFTANADQADSDNDGTGDVCDPDTDNDNDGMPDAWE
NWYDLDTSVNDANQDKDADGYSNLQEFQADTMPNDPEDFPDGTEPVDTDGDGVADDADNC
PSVANPDQTNSDDDGMGDACDTDDDNDGTPDETDAFPLDPAEQSDADEDGVGNNADTDDD
NDGMPDAWETQYGLNPLGDDASEDKDNDGLSNLKEYEQNTDPTDPDDPPPAPVDTDGDGV
RDSKDAFPNDPAEWADSDKDGVGDNADAFPNDPNEQVDTDDDGTGNNADTDDDNDGMPDV
WELEYGLNPLVNDASGDTDKDGYSNLEEYEAETDPTDADSKPESPFEAGVFKVGADGVVQ
IDWLYDGGAYKGELGIFSLRNMEDLEPGSEEFISEAVRRVLSDSEEGHLVLSDPSEGARF
SGSLGEARNWNSGEYKGVKSFDMKPGDDFATILVPNGTFGALADNPGTTNTHLRPLFSLV
SSNPVHGMYLGQIADVNGMGTAFSYEDISANDSDKDYNDLIIQITGAAIDGVPSLDSLTG
GSRRSRAGRDRNDWFDWRAETELGGVIMEHLDAQITDPETLWLSADINTDAALLAYDPEG
RVIGETGGHIPGATFGEDIDGYRFVSLPALEEGGYRLVILGEEDESGILTVRKHQGEDEV
ISEETMSLDIEAHQVLISDVDVASSGESLVIDVADAGESEAGPYDFNGDGIIDDSDIEKV
SSVWNICEGDEGYVPFLDLDDDGCITILDIMPVVNSR
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaagaaaaattttttcagctttggcagttggagcatactggcagtttgcctc
tatgtcatggctttggttatgggcgcagggtttgcaagccctgccagtgctttggactgt
cccgcaggttatgtggaaatgtccggaaaggtcacgactggcgcaggaaccggcattgaa
ggtgtcgaactcagggggcttcccggcaatcccgagacggacgctaacgggcattatgaa
acctgcctgccaaaaggatggacaggaaccgttaaaccgacatatgagataggtatgaat
cctgttacctatgatgtctcattaaataagcccggacctttcagacgtgatctgagttat
tcaaaccttgttcgccccatttacttcaccttcaaaacaacgctgatgcctcttggtgac
gcagtgcttaaaatatacgctaccggggatttagacggaagcaattcgaatgaagatatc
agcgtgtatgcggaaactcctgacggtgatttgctcgaagtcatttatgataatgaacgt
cccggaactattcaggaaataactattccgaaggatatactggctggttacgccgaagac
ggagaagtggtcatcgttcttgctacgggaggcggtgctgcttatgtctccaatgtgtgg
gtacacctcacatacactggttcccctctcaagtataagttttctccgccaagcaagaga
tacacggacatacaagctgatctgacgaatcagaattacagcgacaccaaaacctataaa
atttcagggcatatcagagacaaggacggcaatgcccttcagaaagtaaccctggtcgga
ctgaatgtgatgactgacagcgacggattttatactgcaaatgtgccttccggctggtca
ggaacggttaggccgaatctttcggcaggcggtataacattcagttttaagcctccgcaa
atcccctacacgaatgtagattctgatttcatggagcagaactatacttcaggtctgccc
cttctcacaattcaaggatatgtgaaggacagaagcggaaacggcgttcccggagttaca
atcgaggtggaagacatctatgcgggaaccaaagatacgaccctcacaacagattggcga
ggattttacaaggtcaaggtggaaaatcaagcttctgtaaatctgacacctaaaaaaccg
ggttatacattcaatatcgaatatgcgccttttaaagacgtgtatgaaaatactgatttt
gatttcagagcaaagacatctttaaacacagattgcagtgtttcttccacaaaaaatcag
tcaaaagagggaggtgggaattggagtaatccttatacatggagtaaaggccatgttccg
acctcaaatgaggaagtgcaaatcaacgccgaagatgtggtgatttttgatatttcttct
gcttctgttaaaacgctatgcaattttggaacattacagggcgtagccggttctaatctg
gcaatcgttgctacggatttcattcttaattcaggagaaatcatcggcgcaaacggtgcg
tcaaacgggcagaaaggttctgatgttacgctggccgcgatgaatgttcacaattcaggc
atcattcaggcgggcaacggagcgaatgactccggctatcacgcccaaggaggtcagggc
ggcacaatcatgctcaccggggacaacattaccaacgaaggcagcattatcggagggaat
ggcggagacggacgcggcggtcatggcggttctgcttatggcggtcatggcggttttgca
atgatcatggcaaaaaaaatagcaaaaaataatcgcggcgcttccataacttcaggaatc
ggcggaggggcttatgcttctggtgatcgccattgcagaggccattggttttggaaaaga
tgctggtacactggcggatactatcgcgcaggagataccggcaatacaactttctccggc
ctgattgccatgaacagaggctctgtcaaaggaaaagatgttatctttgatccgagcagc
ctggaaatcattggcgaggatgccgaagttatcgcagaaaacgatattgtcatcacaggc
ggagcagatactactgtctatcttgctgatcttatagacggcagcatctccgcacccgga
aacatcacaattgagcttggccccggaagcacgcttgatatgcggggactcacggcaaag
gcgattcaggccgatggcaatatagaaatttatgctgacaaaatcatcacaaatgacggc
gaagttactgatgttaatgagctggtcaattccggtctgatcgaagccggaggagaagtg
acgcatgaggaaggcaaaatccgttatgaagtgattgtggccggttccgggcaggtgaac
gcagaggccggagaaactgtgaatatcgaattttcagttgtcaatcacagttctgttgac
gacacttatacccttacaaaaaccgatacccagagctggacattgggcgcattggattct
tccgtgtctctggcatctcttgagacaaagaagttctccatggctgtgaatctgccttcg
gagaagggtgtcgaggacacgatcacaatcacggcccgttctgtaaaacatcctgagact
gtcgggacattggaaatccggatttcaaccaacctcattattgcagaagaagatacaacc
gatgcggatgaggacggactgatcaaattcgaggaagacaaactcggaactgatccggaa
aacgctgacactgacggcgacggaatggatgactggtgggaagcgaattataaactgaac
ccgctcagtgacgattccgcggatgacaaagacgctgacggatttaccaatattcaggaa
tatgagagcggcagcgaccccactgtgggagacagcgacggcgacggcatcaatgacggc
agtgacaactgcccgtttactgcaaacgctgatcaggcggattctgacaatgacggaacc
ggcgacgtgtgcgaccctgatacagacaatgacaacgacggaatgccggatgcctgggaa
aactggtatgatctggatacgtctgtaaatgatgcgaatcaggacaaggatgcggacgga
tattccaatcttcaggaatttcaggcggacacaatgccgaatgaccctgaagattttcct
gacggaaccgaacccgttgatactgacggtgacggcgtggcagacgatgcggataattgt
ccctctgttgcaaatccggatcagacaaattctgatgatgacggaatgggtgacgcttgt
gacacggacgatgacaatgacggaactccggatgaaacagatgcttttccgcttgatccg
gctgaacaaagcgacgcagacgaggatggtgtgggaaacaatgcggatactgatgacgac
aatgacggaatgccggatgcgtgggaaactcagtacggactgaatccccttggtgatgac
gcttccgaggacaaagacaacgacggcctgtcaaatctgaaggaatatgaacagaacaca
gatccgacagaccctgatgatccgcctcctgctccggttgatacggacggcgacggggtg
cgggacagcaaggatgcttttcccaacgatccggctgaatgggctgattcggacaaggac
ggcgtgggtgataatgcggacgcttttcccaatgatcccaatgagcaggttgatacggac
gacgatggaacaggaaacaatgcggatacggatgacgacaacgacggaatgccggatgta
tgggaacttgaatacggactgaatccgcttgtcaatgacgcttcaggagatacggataaa
gacgggtattccaatcttgaggaatacgaagcggaaactgacccgactgatgctgattcc
aaacctgaatcgccttttgaagccggcgttttcaaagtcggagcggacggcgttgtccaa
attgactggctctacgacggcggcgcatacaaaggcgaactcggcattttcagtctcagg
aacatggaagacttggaacccggttccgaggaattcatttccgaagcagtgagacgggtg
ctgtcagacagcgaggaagggcatctcgtgctgtccgacccgagcgaaggcgcacgcttc
agcggttctctcggagaggcgagaaactggaacagcggcgaatacaaaggcgtaaaaagc
tttgatatgaagccgggtgacgatttcgccaccatcctggttcccaacggcacattcggt
gcgctcgcggacaatcccggaacaacaaacactcatctgcgtcccctgttctcactggtg
tcatccaatccggttcacggcatgtatctgggccagattgccgatgtcaacggcatggga
acagccttttcctacgaggacataagtgcgaacgacagtgacaaggattacaatgatctg
atcattcagatcaccggtgccgcaattgacggtgttccctcacttgattctctgacaggc
gggagcagacgcagcagggcaggacgtgacaggaacgactggtttgactggagagcggaa
acagagctgggcggcgtgatcatggaacacttggacgctcagattactgatcccgaaacc
ctgtggctttcggccgacataaacaccgacgcggcattgctggcatatgatcccgaaggc
cgagtgatcggtgagaccggcggccatattccgggtgcgacattcggagaggacattgac
ggataccgttttgtgtccctgcccgcgttggaggaaggcggctaccgactggtgatcctg
ggcgaggaagatgaaagcggcattctgaccgtaaggaaacatcagggagaagatgaggtt
atctcagaagagacaatgagccttgatattgaagcacatcaggtgcttatctccgatgtt
gacgtggcgtcatccggcgagagcctggtcattgatgtggctgacgcgggagaatccgaa
gccggaccttatgatttcaacggcgacggcatcattgatgacagcgacattgagaaagtc
tcctctgtctggaacatctgcgagggcgacgaaggttatgttccgttcctcgatctggat
gatgacggctgtatcaccattctcgacattatgccggtggtgaacagcagataa
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integrated database retrieval system
