Desulfonema magnum: dnm_085100
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Entry
dnm_085100 CDS
T07102
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dmm
Desulfonema magnum
Brite
KEGG Orthology (KO) [BR:
dmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmm03009
]
dnm_085100 (rimO)
Enzymes [BR:
dmm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
dnm_085100 (rimO)
Ribosome biogenesis [BR:
dmm03009
]
Prokaryotic type
ribosomal protein modification factors
dnm_085100 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QTA92430
UniProt:
A0A975GSU7
LinkDB
All DBs
Position
complement(6795403..6796878)
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AA seq
491 aa
AA seq
DB search
MVSLGCARNIVDSEFMLGQLTGAGWTVTQTPAEADVIIINTCSFIESAVDESVDTILELA
KLKKHGSCQRLIVAGCLPERFREDIVSALPEVDVFLGTGAFDKIVQAVGNWKLETGNWKL
ETGNSKLETGNWKLETGNWKLETRNSKLENRKSKIGSSMCLLPDPNLSGFGSRVSSFKFQ
VSSFKFQTYLKIAEGCNRHCTYCIIPKLRGKQRSRPVEDIVAEARFLIESGVKELTLVAQ
DTTNYGKDLNQNADLGRLLEEISDISESVWIRFLYGHPDSISESVIRTVSERHNICAYYD
IPIQHASAAVLKQMGRNYSRESLYRLFDNIRFLSPDASLRTTVIVGFPGETDADFELLLR
FAEDVRFDNLGTFIYSDSEDLASHQLPGHVPKNVAQERYDRLMSCQLEISSENNEKYLGK
NLTVLVEEKTEENLFTGRTAFQAPEVDGITYIRTSESSETEQKGTGELEIGSFVSVKITD
TLEYDLIGESL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
ttggtgagtctcggatgtgcgagaaatattgttgacagtgagttcatgctgggccaactt
acaggagccggatggaccgttacccagacacctgccgaggccgatgtcattatcataaat
acctgtagctttattgagtctgccgtggatgaatccgttgacacgattcttgaactggca
aaattgaaaaaacacggatcatgccagcgtcttatcgttgccggatgcctccccgaacgc
ttcagagaagatattgtcagcgcactgccggaagtggatgttttcctgggaaccggggct
tttgacaaaattgtacaggcagttggaaactggaaactggaaactggaaactggaaactg
gaaactggaaactcgaaactggaaactggaaactggaaactcgaaactggaaactggaaa
ctggaaactcgaaactcgaaactcgaaaatcgaaaatcgaaaatcgggagttcaatgtgc
cttttgccagaccctaatctgtcaggattcggctcccgagtttcaagtttcaagtttcaa
gtttcaagtttcaaatttcaaacttatctcaaaattgcggagggatgcaacaggcattgc
acctattgtattattccgaaacttcggggaaagcagagaagccggcccgttgaagatatt
gtcgctgaggcacgctttttaattgaatccggtgtaaaagaactgacgctggttgctcag
gatacaacaaattatggaaaagatttgaatcagaatgctgatcttggccgcctgcttgaa
gaaatttcagatatatctgaaagtgtatggatccggtttttgtacggccatcctgacagc
atcagcgaatcggtgatcagaactgtctcggaacgccataacatatgcgcttattatgat
attccgatccagcatgccagtgccgctgttttgaaacagatgggacggaattactcgcgg
gaatcgctttacaggctgtttgacaatatccggttcttatcaccggatgcgtcgctccga
accaccgtaattgtgggatttccgggagaaactgatgcggattttgaattgcttttaagg
tttgctgaagatgtccgtttcgacaacttgggcacattcatctattctgattccgaagac
ctcgcgtctcaccagcttccggggcatgttccgaaaaatgtggctcaggaacggtatgac
cggctcatgtcgtgtcagctggaaatatcctcggaaaataatgaaaaatatttgggaaaa
aacctcactgtcctggtggaagaaaaaacagaagagaatctttttacaggccggacagct
tttcaggctccggaagtggacgggatcacatatatccgcacttccgagtcctcagaaaca
gaacagaaaggaacaggggaattggagattggaagttttgtcagcgtaaaaatcacagac
acacttgagtatgatcttatcggagaatcgctatga
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