Desulfonema magnum: dnm_088700
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Entry
dnm_088700 CDS
T07102
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dmm
Desulfonema magnum
Pathway
dmm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
dnm_088700 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmm03019
]
dnm_088700 (groL)
03110 Chaperones and folding catalysts [BR:
dmm03110
]
dnm_088700 (groL)
03029 Mitochondrial biogenesis [BR:
dmm03029
]
dnm_088700 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmm04147
]
dnm_088700 (groL)
Enzymes [BR:
dmm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
dnm_088700 (groL)
Messenger RNA biogenesis [BR:
dmm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
dnm_088700 (groL)
Chaperones and folding catalysts [BR:
dmm03110
]
Heat shock proteins
HSP60 / Chaperonin
dnm_088700 (groL)
Mitochondrial biogenesis [BR:
dmm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
dnm_088700 (groL)
Exosome [BR:
dmm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
dnm_088700 (groL)
Exosomal proteins of other body fluids (saliva and urine)
dnm_088700 (groL)
Exosomal proteins of breast cancer cells
dnm_088700 (groL)
Exosomal proteins of colorectal cancer cells
dnm_088700 (groL)
Exosomal proteins of bladder cancer cells
dnm_088700 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QTA92780
UniProt:
A0A975BVW0
LinkDB
All DBs
Position
7070399..7072045
Genome browser
AA seq
548 aa
AA seq
DB search
MAKQIKYDMKAREAMLNGVKTLAEAVVVTLGPKGRNVVIDKSWGSPTVTKDGVTVAKEIE
LEDKFENMGAQMVKEVASKTSDMAGDGTTTATVLARAIYEEGQKLVVAGNNPMAIKRGID
KAVEAAVKELHAMSKPTKDQREIAQVGTISANNDETIGNIIAEAMGKVGKEGVITVEEAK
SMDTTLDVVEGMQFDRGYLSPYFVTDAEKMTASLEDPYILINEKKVSNMKDLLPVLEQVA
KMGKPLVIIAEDVDGEALATLVVNKLRGTLQVAAVKAPGFGDRRKAMLEDIAILTGGQVV
SEDLGIKLESLSLSDLGQAKRISIDKDNTTIVDGAGERSALEGRVKQIRAQVDETTSDYD
REKLQERLAKLIGGVAVINVGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGVALVR
SLDALSKVELDAEQNLGVKVVMRAIEEPLRQIANNAGFEGSVVIDKVKNSEGSFGYNADT
NTYEDLIEAGVIDPTKVVRFALQNAGSVASLMLTTEAMIADKPEEKQDMPAMPAGGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacagataaaatatgatatgaaagcccgtgaagccatgctgaacggggtaaaa
acacttgcagaggcagttgttgtaacccttggccccaaggggagaaacgtggttattgac
aaatcatggggatctccgacagttaccaaagacggggtgacagtggccaaagagatcgaa
ctggaagacaagtttgaaaatatgggcgcacagatggtaaaagaagtcgccagcaaaacc
agtgacatggccggtgacggcacaacaacagcgaccgtactcgcaagagcgatttatgaa
gaagggcagaaactcgttgtggccggtaacaatcccatggctatcaaacggggaattgac
aaggctgtggaagctgctgtcaaagaacttcatgcaatgagcaaacccaccaaagaccag
cgtgaaatcgcccaggtcggcaccatctccgcaaataatgacgaaaccattggcaacatt
atcgcagaagccatgggcaaggttggtaaagaaggcgtcatcacagttgaagaagccaag
agcatggacaccacccttgatgttgtcgaaggtatgcagttcgaccgcggatatctctct
ccttattttgtgactgatgcggaaaaaatgaccgcctcattggaagacccctatatcctc
atcaacgagaaaaaagtcagcaacatgaaagaccttcttcctgtacttgagcaggttgca
aaaatgggcaaaccccttgtcatcattgctgaagatgttgacggagaagcccttgccaca
ttggtcgtgaacaaactcagaggcacattgcaggttgctgctgtcaaggccccgggtttt
ggcgacagaagaaaagccatgctggaagatattgccattctgactggcggacaggttgtg
tccgaggacctgggaatcaaactggaaagtttgtcgctttctgatctgggccaggccaaa
cgtatcagcattgataaagacaacacgaccattgttgacggagcaggtgagcgttccgct
ttggaaggccgcgtaaaacagatccgtgcccaggttgatgaaaccacatctgactatgac
cgtgaaaaacttcaggaacggctggccaaactgatcggcggtgtggcagtgattaatgtc
ggcgctgcgaccgaaaccgaaatgaaagagaaaaaagcccgtgttgaagatgctctcaac
gcgacccgtgcagcagttgaagaaggtatcgtccccggaggcggtgtcgcgctggtacgc
agtctggatgctctgagcaaagtagaactcgatgctgaacagaatctgggtgtgaaggtt
gtcatgcgagccatcgaagaaccgcttcgccagattgccaacaatgctggttttgaaggc
tctgttgtgattgacaaagtaaagaacagcgaaggctctttcggatacaatgctgacacc
aatacctatgaagacctgattgaagcgggtgttattgatcccacaaaagtggtacgtttt
gcgcttcagaatgcaggaagtgtcgcttccctgatgctgaccacggaagccatgatcgct
gacaagcccgaagaaaaacaagatatgccagccatgcccgccggcggcggaatgggcgga
atgggcggaatgggcggaatgatgtaa
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