Desulfonema magnum: dnm_091780
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Entry
dnm_091780 CDS
T07102
Name
(GenBank) Exonuclease domain-containing protein, HRDC domain-containing
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
dmm
Desulfonema magnum
Brite
KEGG Orthology (KO) [BR:
dmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmm03016
]
dnm_091780
Enzymes [BR:
dmm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
dnm_091780
Transfer RNA biogenesis [BR:
dmm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
dnm_091780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DUF4665
Motif
Other DBs
NCBI-ProteinID:
QTA93081
UniProt:
A0A975BWM2
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All DBs
Position
complement(7309631..7310779)
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AA seq
382 aa
AA seq
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MKDNNKLAYQIINTESELRELATALEKEKTVAVDLEADSMYHFKEKVCLLQIAAKQANII
IDPLQINDLSPLKPIFFRHDIRKIFHGADYDVRSLYRDFNIEINNLFDTQIACRFLGIPE
TGLEAVLQKQFHISLDKKYQKKDWSQRPLPEDMMDYAAKDAVYLVPLAKLLEKRLEKKGR
LSWVYEECHDLSKVRCASSDDDPLYLRFKGAGRLRPRNLAVLESLLQFRKQIAEKKDKPL
FKIFGNNSLMRIATAKPVTLQHLERIKALSRKQTAMYGDIIVARVRKALKIPAKDLPVYP
RKKGPVLSPKVPERVKAIKRWRDARAKKLDIDPALICNKALISVIAVQNPRNTEEIESIE
EMKNWQQEAFGRDIVTVLRKVR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataacaacaaacttgcctatcagatcattaataccgaatccgaactcagagag
ttggcaactgcccttgaaaaggagaaaaccgtcgcggttgacctggaagcagattccatg
tatcattttaaagaaaaagtctgccttcttcagatcgctgcaaagcaggcaaatatcatc
attgatcctttacagattaatgatttgtctccgctgaaacctatctttttccgacatgat
atcaggaaaatttttcacggggcagattatgacgtgcgttccctgtacagagattttaat
atcgaaatcaacaatctttttgacacacaaattgcgtgccggttcctgggaatcccggaa
accggtttggaagcggtgcttcagaaacagtttcatatcagccttgataaaaaatatcag
aaaaaagactggtctcagcggccattgccggaagacatgatggattatgccgcgaaagat
gcggtctatcttgttccccttgccaaacttcttgaaaaaaggcttgaaaaaaaaggccgg
ctttcctgggtgtatgaagaatgccatgatttaagcaaggtaagatgcgcttcgtctgat
gatgatccgctgtatttgagattcaaaggggcggggcggcttcgccccagaaatcttgct
gtccttgagagtcttcttcagtttcgtaaacaaatagcggagaagaaggacaagccgctt
tttaaaattttcgggaataattctctgatgagaattgcaacagcaaagcctgtaactttg
cagcatttggaaagaattaaagcgttgagccgaaaacagaccgccatgtatggtgatatt
atcgtggcccgggtcagaaaagccctgaaaattcccgcgaaagacctccctgtgtatccg
agaaaaaaaggccctgtactgtcgcccaaagtgcctgaaagagtcaaagccatcaaacgc
tggagagatgccagggctaaaaagctcgacatagaccctgctttgatttgtaacaaggcc
ctgatcagcgtcattgccgtacaaaatcctcgcaatacagaggaaattgagagcattgag
gaaatgaaaaactggcagcaagaggcatttggaagagatattgttacggttttgcgcaaa
gtccggtag
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