KEGG   Desulfonema magnum: dnm_098960
Entry
dnm_098960        CDS       T07102                                 
Name
(GenBank) CRISPR-associated helicase, Cas3-like
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
dmm  Desulfonema magnum
Brite
KEGG Orthology (KO) [BR:dmm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dmm02048]
    dnm_098960
Enzymes [BR:dmm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     dnm_098960
Prokaryotic defense system [BR:dmm02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    dnm_098960
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD HD Cas3_HD ResIII Helicase_C PhoH SWI2_SNF2 HDOD AAA_22 MIOX SNF2-rel_dom SLED NAT10_TcmA_helicase DUF3151
Other DBs
NCBI-ProteinID: QTA93788
UniProt: A0A975BY05
LinkDB
Position
complement(7874684..7876876)
AA seq 730 aa
MTQKYYAHSLEGKPFSEWQPLDEHLRNVAEMAQSFAKDFGADEWAYLAGLLHDVGKYSAA
FQKRLGVDMDSNAHIEKVAGRPDHSTAGAKLATTFLKDKGKGKILAYAIAGHHAGLPNGK
SNDRSCLIERLNKDVHDYSACPQSILNIREPDVLPFNPDPKRMGFQCSFFIRMIYSCLVD
ADFLDTEKFMDKEKASWRKGYPPLTSLNEKLTSHIRELSAKARPGQINKHRADILQHCLK
AAENPRGLFSLTVPTGGGKTLSSLAFALKHALKYKLSRIIYVIPYTSIIEQNAAVFRKIL
GKDAVLEHHSNFEPKQEDRRSRLASENWDAPLIITTNVQFFESLFGRKSSRCRKIHNIAN
SVVILDEAQMLPVRLLKPCIEVLKELSSVYGTSIVLCTATQPALSEREDFRDGLKDVDEI
IPEPRVLYKAFKRVRTEKLGELSDDNLADMLRKEDKVLCVVNTRKHARLVFEKIKEQEGS
FHLSALMCPAHRTEKFKQIREALYKNRQCRVISTQLIEAGVDIDFPVVFRSAAGLDSIAQ
AAGRCNREGDLSEPGQVYIFSPEAGLPPGHFRQNAQTAEMVMHHHDDPLSLAAVDEYFRT
LYWAKGEKLDEYQILNDLDEGKFKGDFPFRTAAKKFKIIKDNMKSLIIPWNEDAEKLIRS
LRHSKYPAPFARKLQRFTIQIFPEVLNSLTAGVECLHDQYHVLTNRDLYRDDLGLCPENP
TFHEFESLFA
NT seq 2193 nt   +upstreamnt  +downstreamnt
atgacacagaaatattatgcacacagtctggagggaaagccattttcagaatggcagcca
cttgatgaacatcttagaaatgtcgcagaaatggcccaatcatttgccaaagattttgga
gctgatgaatgggcttatttggcagggcttttgcatgatgtcgggaaatattccgcggca
tttcagaaaagactcggtgttgatatggacagtaacgcccatattgaaaaagttgccggg
cggcctgaccattccactgccggagcaaaacttgctacaacatttttgaaagataaaggg
aaagggaaaattctggcttatgccattgccggacatcatgccggacttccgaacggaaaa
tcaaatgatcgctcatgccttattgaaagactgaacaaagacgttcatgattattcagcc
tgccctcagagcatcctgaatatcagagagcccgatgtgttgccctttaatcctgacccc
aaacgtatggggtttcagtgttccttttttatacggatgatttattcttgtcttgttgat
gcggattttctggacacagagaaatttatggataaggaaaaagcatcatggcgtaaaggt
tatcctcctttgacatcgttaaatgagaagctgacatctcatatcagggagctgtcagca
aaagcacgccccgggcagatcaacaaacaccgggccgatattttgcaacactgtctcaaa
gctgcggaaaacccgcggggattattttccctgactgttcccacaggcggcggaaaaacc
ctgtcatcacttgcttttgcactgaaacatgccctgaaatacaaactgtcaagaattatt
tatgtcatcccctataccagcatcattgaacaaaatgcagcggtttttcggaaaattttg
ggaaaagatgctgtgttggaacatcacagcaattttgaacccaaacaggaagaccggcgg
tcccgcctggcatccgagaattgggacgcaccgctgatcattacaacaaatgttcagttt
tttgaatccttattcggaaggaaatcatccagatgcagaaaaatccataatattgccaac
agcgttgttattctggatgaggcgcagatgctgcccgtgcgtctgctgaaaccctgtatt
gaagttttgaaggaactctcatctgtttacgggacaagcatcgtcctgtgtaccgccaca
caacctgctttatctgaaagagaagatttcagagatggtctgaaagatgttgatgaaatt
atccccgaaccccgagtgctttataaagctttcaaacgagtccgcacggagaaattaggt
gaactgtctgatgataatttggccgatatgctgcgcaaagaggataaagttctgtgtgtt
gtaaatacccgcaaacatgcgcgtctggtttttgaaaaaatcaaagagcaggaaggctcc
tttcatctgagtgcgctgatgtgtccggcccaccggacagaaaagtttaagcagataaga
gaggcgctttataaaaatcggcagtgccgggtcataagtacgcagttaatagaagccgga
gtggatattgattttcctgttgtatttcgttctgccgcgggccttgattccattgcccag
gcagccggacgttgtaacagggaaggcgatttgtctgaaccgggacaggtttatattttt
tcgcctgaagcgggtctgcctccgggacatttccgtcagaacgctcagactgctgaaatg
gtcatgcaccatcatgatgatccgttatcgcttgcagcagttgatgaatattttaggacg
ttatattgggcaaaaggagaaaagctggatgaatatcagattctgaatgaccttgatgaa
ggcaaattcaaaggggattttcctttcagaacagcagccaaaaagtttaagatcataaag
gataatatgaaatcccttattattccctggaatgaagacgcagaaaaactcattcggagc
ctgcgccattccaagtatcctgccccgtttgcccgtaagcttcagcgatttaccatacag
atattcccggaggttctgaatagtctgacagcaggtgttgaatgtctgcatgatcagtat
cacgtcctgaccaacagggatttgtatcgggatgatctcggactttgccctgaaaatccg
actttccacgaatttgagagtttgtttgcatag

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