Desulfonema magnum: dnm_100400
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Entry
dnm_100400 CDS
T07102
Name
(GenBank) Putative DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
dmm
Desulfonema magnum
Pathway
dmm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
dnm_100400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmm03000
]
dnm_100400
03400 DNA repair and recombination proteins [BR:
dmm03400
]
dnm_100400
Enzymes [BR:
dmm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
dnm_100400
Transcription factors [BR:
dmm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
dnm_100400
DNA repair and recombination proteins [BR:
dmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
dnm_100400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF4528
DUF6233
HTH_50
Motif
Other DBs
NCBI-ProteinID:
QTA93932
UniProt:
A0A975BYX5
LinkDB
All DBs
Position
complement(7990466..7991923)
Genome browser
AA seq
485 aa
AA seq
DB search
MMKYNTDMDKAFSIARIKKDKNFDGTFFFGVKTTGIFCRPSCPSPIAKEENVIYFNTMFE
ALEQGFRPCFRCRPDISTEYYNGNPDGTYVVNTALKMICDGYLNYHSIRELSKELLVSDR
YLRKLFIDNLGVPPVKIAKYHKALFAKKLLIFSDQSVTDIAFASGFGSIRQFNDVFKAVF
GKPPTMVRKESFNEKSASGNTTLLLRYKKPFDFRQTFSFMKQRAMEGVEVFTENSYGRTF
RTDHAKGFFTVTDSPEQSALELRIGCDDIKCYMDIYNRVRKVFDLDTDFRLINEKFAKHE
LLSKGMKNGHVPRLPVAFDPFEFLVRAILGQQISVKAATTLAARLVKKAAIKSDKSFPHG
LDYFFPNPSELLNSELDGFGVSKIRQATIKAAAHAILDKEVRLTANQSFDQFHKDFSALK
GIGDWTVNYVAMRGLGMPDSFPASDLGVARALAKDGSTPSEKDIRKMAEHWRPYRAYATL
CLWNL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatataacactgatatggataaagcgttcagcatagccagaataaagaaagat
aaaaactttgacggaactttttttttcggagtaaaaacaacaggtattttttgcagaccg
tcgtgcccgtctcccattgcaaaagaggagaatgtcatctatttcaacaccatgtttgag
gcgcttgagcagggtttcagaccttgtttcaggtgcaggccggatatttccacagagtat
tataacgggaatccggatggcacatatgttgtgaacacagcgctgaaaatgatctgtgac
ggttatctgaattatcattccatccgtgagctgtcaaaagaacttcttgtctcagacaga
tatctgagaaagctttttattgataatctgggcgtgccgcctgttaaaatagcaaagtat
cacaaagctctttttgccaagaaactcctcatcttttcagatcagtctgtaacagatatc
gcatttgcatcgggttttggttcgattcggcaatttaacgatgtgtttaaagcggtcttt
ggaaaaccccccaccatggtcagaaaagaatcatttaatgaaaagagcgcctccggcaac
acgacgcttttactgagatataaaaagccatttgatttcaggcagacgttctccttcatg
aaacaaagggcaatggaaggtgtcgaagtgtttacggagaacagttatggcagaacattc
agaacagaccatgcaaaagggttctttaccgtgacagacagccctgaacaatctgccttg
gaactgagaattggctgtgatgatataaaatgctacatggatatctataacagagtccgt
aaggtttttgaccttgataccgacttcaggcttataaacgaaaaatttgcaaaacacgaa
cttttgtcaaagggaatgaagaacggccatgtgccgcgattgccagttgcctttgatccg
ttcgagtttcttgtgagggcaattctggggcagcagatttccgtaaaggctgctacaact
ttggcggcaagactcgttaaaaaagctgcgataaaaagcgataaaagctttcctcatggt
ttggattatttctttcccaatccgtcagaactattgaattcggagcttgacggatttggg
gtgagcaaaatcagacaagccacgataaaagctgccgcacatgcgattctggataaggag
gtaaggctgacggccaatcagtcctttgatcagtttcataaagatttttcagcgctgaaa
ggtatcggtgattggacagtcaattatgtcgcaatgagaggactgggaatgcctgacagc
tttcctgccagcgatttgggcgttgccagagcgcttgcaaaagacggcagcacgccatca
gaaaaagacataagaaagatggctgaacattggcggccatacagagcttatgcaacttta
tgtctttggaatttatga
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