Drosophila miranda: 108150972
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Entry
108150972 CDS
T06132
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
dmn
Drosophila miranda
Pathway
dmn04140
Autophagy - animal
dmn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108150972
04148 Efferocytosis
108150972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmn04131
]
108150972
Membrane trafficking [BR:
dmn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108150972
Hops complex
108150972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_5
zf-RING_16
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3H2C3
Hyaluronidase_1
zf-RING_UBOX
DUF2175
zf-RING_11
DUF1664
Vps39_2
Motif
Other DBs
NCBI-GeneID:
108150972
NCBI-ProteinID:
XP_017134798
LinkDB
All DBs
Position
XR:complement(28323781..28327188)
Genome browser
AA seq
1003 aa
AA seq
DB search
MAQAMPNQPKFLPRIERMVTTSNSYVATSSGNPFDVEEEDEIFSKHKIVLRVPTDCTGDL
MHLTVSKNWLVCLLGSAERTTLLRFFLPRAIPPGEVALERYLSGSGYKITKIFLDHTGHH
LVISVVPKSASAGVSADFLYIHSTESSTAQQLKVRRIEKFKDHEITAVAFNPYYGNESTT
GPILLGTSRGLLFETELSPTSDSHTQRKQLYDLGLGRPKYPITGLKLLRVPNSSRYIVVV
TSPECIYTFQETLKPEERTLQPIFAAYVNGVQEPHCEERKTDLTYSQLRFFAPPNSKYPK
QWAWLCGAGIRVGELSIEANGSATLLGDTLISLEFEKVKHLSYDERRLNVPKAFVLTEYH
AVLLYADHIRAVCLLNQELVYQEPLDEARVGKPLNIERDDITGSIYLYTVKAVFNLRITR
EERNVWRIYLDKGQYELATAHAAEVPEHLDLVLAQRADAAFIEGSYEVAADYYAETGKSF
EEVCLKFMVLPDKRPIINYVKKRLSRLTTMPADVEAMEEDHATAIKALVVWLIDLYLIQI
NMPDQNADWRQAWQSEYDEFMREPPVLACTTRNSAAVQQLIAEHADPHNMAQFAIAIGDY
EEVVAQQLKAERYVEALQTLGKQRDMQLYYKYAPVLMEKLPKPTIDVLIAQGANLEVEKL
VPTLIVIDTPEQREQTIRYLEFAIYKLNTTNDAIHNFLLHLYAQYEPKLLMKYLEIQGRD
ESLVHYDIHYALKVCTDLDVKVACVFLQCILHMWISAVDLALKFDMKLAKETASRPTDSR
MRRKLWLRIACHDIKGTNDVKKALNLLKECELLRIEDLLPFFSDFEKIDNFKEAICDALK
DYNQRIQELQREMAETQEQSDRVGKELQQLREHRICIDAQDTCSICEIMVPIRPFFVFIC
GHKFHSDCLEKQVMPLLNKDRSRRLGILKQQLEAEMQTQSQAQASTSTAAPKLQTVEQQR
KRAEIKTEIEDILASECLYCSMFIDTIDQPFVDDWEQVNVEWD
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggcaatgccaaaccagcccaaatttctccctcgcatagagcgcatggtgaca
acatccaactcgtacgtcgcaacttcatccggcaatccctttgatgtggaggaggaggat
gagatatttagtaaacacaaaatagtactccgagtgccgaccgactgcacaggcgacctg
atgcacttgactgtgtctaagaattggctcgtttgcttgctaggctcagcggaacggaca
actctactgcgctttttccttccgcgtgctattccaccgggtgaagtggcgctcgagcga
tatctttcggggtctggctacaagattacaaagatttttctagaccacaccgggcatcat
ctggtcatctccgtcgtcccgaagtcagcatcagccggagtctccgccgactttctgtac
attcacagcaccgaatcgtccacagcgcagcagttgaaggtgcgtcggatagaaaagttc
aaggaccatgaaatcacagctgtggcgtttaacccgtactatggcaatgagtcgacgaca
ggtcccatactcctgggcaccagtcgcggccttttattcgaaacagagctaagtcccacc
agcgacagtcacactcagcgcaagcagctctatgacttgggtctgggtcgccccaaatat
ccaatcaccggcttgaaattgctacgggtgcccaacagcagtcggtacatcgttgtggtc
actagtccggaatgcatttacacattccaggagacactgaagccggaagagcgcaccctc
cagcccatattcgctgcgtatgtgaatggggtgcaagagccacattgcgaggagcgcaag
accgacttgacctactcccagctacgattctttgccccgccaaatagcaaataccctaag
cagtgggcgtggctctgcggggcaggcatacgcgtgggtgaactttcgatcgaagcgaat
ggcagtgcaactcttctgggcgacaccctgatcagcctcgaatttgagaaggttaagcac
ttgtcgtacgatgagcgtcgcctgaatgtgcccaaggcattcgtcctcaccgagtaccat
gccgtgctcctctatgcagatcacatacgagccgtttgcctactgaaccaggagctggtc
tatcaggagccactggacgaagcccgagtcggcaagccgctaaacattgagcgtgatgac
atcaccggatccatctatctgtacaccgtcaaggcagtgttcaacttgagaatcacgcgc
gaggaacgaaatgtgtggcgcatatacctggacaagggacaatacgaactagctacagcc
cacgcagcggaggtgcccgagcatctggacttggtccttgcgcagcgtgcagacgccgcc
tttatagagggctcctatgaggtggcagcagactattatgcggagacgggcaagtccttc
gaagaggtctgtctgaaatttatggtgctgccagacaagaggccaattatcaactacgtg
aagaagcgtcttagccgtttgaccacaatgccagctgatgtggaggccatggaggaggat
catgcgactgccattaaagccctggtggtgtggctcatcgatctttacctaattcaaata
aacatgcccgaccaaaacgcagactggcgccaggcgtggcaatccgagtacgacgagttt
atgcgggagccgcccgtcctcgcctgcacaactcggaatagcgcagcggtacagcagcta
attgccgagcatgcggatccccacaacatggcccagttcgccatcgccattggcgactac
gaggaagtggttgcacagcaactgaaggccgaacgttatgtcgaggcattgcagacacta
ggcaagcaacgcgacatgcagctctattacaagtacgcgcccgtacttatggaaaagctg
cccaagcccacaatcgatgtcctcatagcgcagggcgccaacttggaggtggagaagctg
gtgcccacacttatagtcatagacacgcccgagcagagggagcagaccattcgttatctg
gaatttgccatctataagctgaacaccactaacgatgccatccacaatttcctcttgcat
ctttacgcacagtacgagccaaaattgctcatgaagtacctagaaattcagggtcgggac
gaaagtcttgtgcactatgacatccactacgcgctcaaggtgtgcacagatctcgatgtg
aaggtggcatgtgttttcctgcagtgtatactgcacatgtggatttctgcggtggatctg
gcactgaaattcgatatgaagctggccaaggagacggcctcgaggcccacagacagtagg
atgcgccgcaaactatggctgcgtatagcttgtcatgatatcaagggaaccaacgatgtg
aagaaggccctcaatctgctcaaagagtgcgagctgctgcgcatcgaggatctattgcca
ttcttttccgactttgagaaaatagataattttaaggaggctatttgcgatgccttaaag
gactataatcagcgtatccaagagctgcagcgtgaaatggccgagacccaggagcagtcg
gaccgcgtaggaaaggagctgcaacaactgcgtgagcatagaatctgcatagatgcccag
gacacttgctccatctgcgaaatcatggtgccaataagaccattctttgtgttcatctgt
gggcacaaattccacagtgactgccttgaaaagcaggtgatgcctctgctcaacaaggac
cgcagtcggcgactgggcatattgaagcagcagctggaggcagaaatgcagacgcaatcg
caagcgcaggcctcgacttccacggctgctcccaagctgcaaacagtcgaacagcaaaga
aagcgtgccgagatcaagacggaaatcgaggacattctcgcgagcgagtgcctctactgt
agcatgtttattgataccatcgatcagccgttcgttgacgattgggaacaggtgaatgtc
gagtgggactag
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integrated database retrieval system
