KEGG   Drosophila miranda: 108151274
Entry
108151274         CDS       T06132                                 
Name
(RefSeq) roquin-1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
dmn  Drosophila miranda
Brite
KEGG Orthology (KO) [BR:dmn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dmn03000]
    108151274
   04121 Ubiquitin system [BR:dmn04121]
    108151274
Transcription factors [BR:dmn03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    108151274
Ubiquitin system [BR:dmn04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108151274
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-C3HC4 zf-RING_2 Prok-RING_4 zf_CCCH_4 zf-C3HC4_2 zf-C3HC4_4 Vesi_VP2 RhoGAP Baculo_IE-1
Other DBs
NCBI-GeneID: 108151274
NCBI-ProteinID: XP_017135289
LinkDB
Position
XR:9609089..9614564
AA seq 873 aa
MPIQAPSWTDFLNCPICGNEFAASQRFPISLGCGHTICKLCLTTLYNRQCPFDQTQIVTD
IDNLPTNHALLQLVAKGPGPGLGPPGKDSVEPSVDFSQHAPPSVQKLDPEQLKCYKLGKQ
CIEDLALHLKSFLNLNNGNLLTRPMQRKLVTLVNCQLMEEEGRVRALRAARSLGERTVTE
LILQHQNPQQLSSNLWAAVRTRGCQFLGPAMQEEVLKLVLLALEEGSALSRKVLVMFVVQ
RLEPQFPQASKTSIGHVVQLLYRASCFKVSKREADSSLMQLKEEFRTYDALRREHDAQIV
QIATEAGLRIAPEQWSSLLYGDVLHKSHMQSIIDKLQTPSSFAQSVQELVIALQRTSDPA
KLSNLHNHLKYLANIDPCAEVAPWQDVAEALDAVRHSVVGLVNFLQHHGVRKTQDAIGSA
GAAISNPKYKISLCRDLNVRRVCPRGASCTFAHSQEEVERYRARNRGKHIKTPLPGPPLM
VGDDCQVLGVAPMMPMSPMHYMASPRGYLDPNANLPGLGLSPGATHPPQPPQLLHHPSIA
RQMNGLMVPGRFDPRFNYGPGQPIAQSRNPSPREYQASPGPVPVPGPPPPQQQQPQQRNL
SNPPSFNSNLHKGYMLPADVFHPTAYGYGSEEKLGHPWEQHPYQQQQHQQQQQPQQQQQQ
PPPSSKPNPSRPLSILAATADTSFYEKKPPNNVSIDMDMAKPLASLVASGSGAGEAAGDV
LDALPLFRRTNNQSHNHNHSHSHGHSQGQNNSSLLFFERSDSILNDDGSTFDMPTGSSMH
SRYGPICPKNSAASNWNNWIMENDTSSDLGYAGYKADRNDNFNSHKSSQMWGRKPQLLSE
DSFEGGIDSGMMLQLEKNLVDIVDPDDSGIKVD
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgccgattcaggctccctcatggacagactttctgaactgtcccatctgcggcaatgag
tttgcggccagtcagcggttccccatcagcttgggatgtgggcataccatttgcaagctc
tgcctgaccaccctctacaatcggcaatgtcccttcgatcagacgcagattgtcaccgac
atcgacaatttgcccactaaccatgctctgctccagctggtggccaagggtccgggtcca
ggtctgggtccgcccggcaaggactcggtggagccttctgtggacttctcccagcatgcg
ccacccagtgtgcagaagctcgatccggagcagctcaagtgctacaagctcggaaagcag
tgcatcgaggatctggccctgcacctgaagtccttcctcaacctcaacaacggtaacctg
ctgacgcgacccatgcagcgcaagctggtgacgctcgtcaactgtcagctgatggaagag
gagggacgcgtgcgggcattaagagcggcccgttcgttgggcgagcgcaccgtcaccgag
ctgatcctgcagcaccagaatccccagcagctcagctccaacctgtgggcggcggtgagg
acgcgtggctgccagttcctcggcccggccatgcaggaggaggtgctgaagctggtcctg
ctggccctggaggagggctcggcgctgtcccgcaaggtgctggtcatgtttgtggtgcag
cgcctggagccgcagttcccgcaagcctccaagacgagcatcggccatgtggtgcagctg
ctctaccgcgccagctgcttcaaggtgtccaagcgcgaggcagactcctcgctgatgcag
ctgaaggaagagttccgcacctacgatgcccttaggagggaacacgacgcccagatcgtt
cagatagccaccgaggcagggctacggatcgcgcccgagcaatggtcttccctcttgtac
ggcgacgtgctgcataagagccacatgcagagcatcatcgacaagctgcagacgccgtct
tccttcgcccagtcggtgcaggagctggtcatcgccctgcagcgcaccagcgaccccgcc
aagctctccaatctccacaatcatctgaagtacctggccaacatcgatccgtgcgcggag
gtggccccctggcaggacgtggcagaggccctggatgcagtgcgtcactccgtcgtgggc
ctagttaacttcctgcaacatcatggcgtacgcaagacccaggacgccatcggcagtgct
ggagcagccatcagcaatccgaagtacaagatcagcctctgccgggacctgaacgtgcgg
cgtgtgtgtccccgcggcgccagctgcaccttcgcccattcgcaggaggaagtggagcgc
taccgcgcgaggaacagaggtaaacacatcaagacacctctgccaggacctcctctgatg
gtcggagacgattgtcaggttctgggcgtggcgcccatgatgccgatgtcccccatgcac
tacatggcatcacccagaggctacctcgaccccaacgccaacctgccaggcctcggactc
tctccaggagccacccatcccccacagccaccacagctgctccatcacccctccattgcc
cgccagatgaatggtctgatggtgcccgggcgcttcgatccgcgcttcaactacggcccc
ggacagccgatcgcacaatccaggaacccctcgcccagggagtaccaggccagtcctggc
cccgtccccgtcccagggcccccaccaccgcaacagcaacagccacagcaacgcaatcta
tccaacccaccgagcttcaatagtaacctccacaagggttatatgcttccagcggatgtg
ttccatcccacggcctatggctatggcagcgaggagaagctgggccatccctgggagcag
catccctaccagcagcagcagcaccaacaacagcaacaaccacagcagcagcagcagcag
ccgccgccgtccagcaagccgaatcccagccgaccgttgtcgattttagccgcaacagct
gatacctcattttatgaaaagaaaccgccgaataatgttagcatagacatggacatggcc
aagcccctagcttccctagttgcttctggttctggggctggcgaagccgcaggcgatgtc
ttagatgccctgcctctcttccgacgcaccaataaccagagccacaatcacaatcacagc
cacagccacggccatagtcaagggcagaacaactcctcgctgctcttcttcgagcgctcc
gattccatattgaacgatgatgggtccacattcgacatgcccacaggctcctccatgcac
agtcgctatggtccgatctgtcccaaaaactcggcggcgagcaactggaacaactggatc
atggagaacgacacgagcagcgatctgggctatgcgggctacaaggccgataggaatgat
aatttcaacagccacaagtcgtcgcagatgtggggcaggaagccgcagctgctgtcggag
gatagcttcgagggcggcattgacagtgggatgatgctgcagctggagaagaatctggta
gacattgtggatcccgacgacagcggcatcaaggtggactaa

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