Drosophila miranda: 108151407
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Entry
108151407 CDS
T06132
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
dmn
Drosophila miranda
Pathway
dmn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108151407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmn03400
]
108151407
DNA repair and recombination proteins [BR:
dmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108151407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
108151407
NCBI-ProteinID:
XP_017135484
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All DBs
Position
XR:complement(24865870..24871155)
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AA seq
1189 aa
AA seq
DB search
MSKKLNTSVGGTPTNTLFNYFTKSPAVDKKKLVPSVKAESTPTHRTDSEKENLNNGKNLE
VKKETETKPSAKRKLPISTPSDEEELGGRRKRKRIVLPESESEDEMEETKSEDDFSGDES
DYEPDGKDDAASEESESGDDEGEEPMDDEESEDDPTPKKSRNKDKNHNNNNNEPVGQKVK
LAEGSTFQEKLKNIQSNVKQDAAYDEIVTTSSSLDEPVVWPHQKLEFLQPDKIKDKEGRR
PDHPDYDKSTLHVPEKFLNILSPGVRQWWVLKSNNFDCVMFFKVGKFYELYHGDADVGVN
ELGFTYMRGEFAHSGFPEISFDKMSTILIDRGYKVARVEQTETPDMVAERCKRIKSTKFD
KVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLALVEQDEGTWSRFGICFIDTSIGDFH
LGEFEDDKNCSRLLTLLSHHMPVLLLSEKSALSLRTQQVVRTVLGGILREQLPSNGAHVC
NAEKTLKLLAERYYAGNGSEDNWPLVLRTMQSDSDHLGLTPSDNYKLALKALGQCVYFIN
KCLLEPKVLPMARYQMYVPPDQLAEAKPAVVSALRRSHMVLDATTLSNLRIIGEEHTLQS
TLDHCCTKFGKRLLHHWLCAPSCDIEILKERQAAIGELLRLPSELQEMRALLAPMPDFER
NLAQIHLFGNKQVKQTGHPDSRAILFEEKIYNKQKLVGFMAVLKGFNALTKLPLMFQQCE
TPLIKRITQLTTSGGSFPDLSEELRYFATAFDHDAAAKTGVIAPQPGMDAEYDVVMDRIE
EIEKRLKTYLVEQERHFGCRVTYFGSDKKRYQLDVPESHAHKANKSYALEGQTKGKKPSR
RYTTAETKGLLKDMQQAEDAKNVVLKDLARRLFEKFSNHYEQWKQCIDCVANLDVLGSLA
EYARQQMIICVPELVSGVDQPFIELQEGYHPCVNTSTYIPNGLELGTKTEAPLSLLTGPN
MGGKSTLMRELGLLVIMAQIGAHIPAASCRLSLVDRIFTRLGAQDDILAGHSTFLVELNE
TSLILKHATCHSLVLLDELGRGTATYDGTAIAASVVNFLANLKCRTLFSTHYHNLIDYFH
NDQRVTLGHMACMVENEDTTDPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRA
FELSKKVEAIALQRKITAKIVASSGEKDFKQQKLHALKDLLQQLKMCHV
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagaagctgaatacgagtgtgggcggaacgcccacaaacaccttgtttaactat
ttcaccaagtcaccagccgtcgacaaaaaaaagcttgtgcccagcgtaaaggcggagtca
acgcctactcacagaacggactcagaaaaggaaaatctcaacaatggcaagaacctggaa
gtgaagaaggagaccgagaccaagccttcggcaaagaggaagctgccaatttcaactccg
tcggatgaggaggagcttggtggtcggcgcaaaagaaaacgcatcgttctacccgagtcg
gagagcgaagatgagatggaggagaccaaatccgaagacgacttttccggcgatgagtct
gactatgaaccggacggaaaggatgatgctgccagtgaggaaagcgagagtggcgacgat
gagggcgaagagcctatggatgacgaagaatcggaagacgatcccacgcccaaaaaatcc
cgcaacaaggacaaaaaccacaataataacaacaatgagccggtgggccaaaaggttaaa
ctggctgaaggctccacattccaggagaagctaaaaaacatccagagcaatgtgaagcag
gacgcggcctacgatgagatagtgaccacttcatcgagcctcgatgagcctgtggtgtgg
cctcatcagaagctcgagttcttgcagccggacaagattaaggacaaggagggcaggcgc
ccagaccatccggactacgataagagcaccctgcatgtgcccgaaaagttcctcaacatt
ctgtcgcctggcgtgcgacagtggtgggttctgaagtcaaacaactttgactgcgtcatg
ttctttaaagtgggaaaattctatgagctgtaccatggggatgccgatgtgggtgtcaat
gagctgggatttacctatatgcgtggcgagtttgctcactctggtttcccggagatatcc
tttgacaaaatgtccacaatcctgatagataggggctacaaggtggctcgagtggagcaa
acggaaacgcccgacatggtggcagaaagatgcaagcgcattaagtccaccaagttcgac
aaggtcgtggcccgtgagatctgtcagatcacgaatcggggaactcaggttttcgggtcg
cagtgtaaaatcggtcccaatcatcagcccaactacatgttggccctggtggagcaagac
gaggggacgtggagcaggtttggcatttgctttatagacacatccatcggggactttcac
ctgggcgagttcgaagacgataagaactgctctcgattgctcacgctgctctcccatcac
atgcctgtgctccttctcagcgagaaatcagccctcagcttgcgcactcaacaggtggta
cgcaccgtgctcggaggaatactgagggagcaactgcctagcaatggagctcatgtctgc
aacgctgagaagactctaaagctgttggccgagcgatactatgccggaaacggatccgag
gacaactggccgttggtcctgcgcactatgcagtccgattcggatcacttgggtctcacg
ccctccgacaactacaagctggcattgaaggctctgggtcagtgcgtctatttcatcaac
aagtgtttgctggagccgaaagtactgcccatggctcgttaccagatgtatgtgccgccc
gatcagctggcagaggccaagccagctgtggtctccgccctgagacgctctcacatggtc
ctcgatgcaacaactctgtcaaacttaaggatcatcggcgaagaacacaccctgcagtcc
accttggaccattgctgcaccaagttcgggaagcggctgctgcaccactggctctgtgcc
cccagctgcgatatagagatactaaaggagagacaggcagccattggagagctgttgcgg
ctgcccagtgagctgcaggagatgcgggcattgctggctcccatgccggactttgagcgt
aatttagcgcaaatccatctgttcggcaacaagcaggtcaaacagaccggtcacccagac
tcccgggccatactcttcgaggagaagatttacaacaaacagaagctagtgggctttatg
gcagttctcaagggattcaatgctctgaccaagctacctctgatgttccagcaatgtgag
acccctctgatcaagagaataactcagttgactacttcggggggatcctttcccgacctc
agcgaagagctgagatactttgccactgccttcgaccatgatgcagctgccaagacggga
gtaattgcgcctcagcccggaatggatgcagagtatgatgtagtcatggatcggatagaa
gagattgagaaacggctcaagacctaccttgtggagcaggagcgtcactttggctgccgt
gttacctactttggctccgataagaagcggtaccagttggatgttcccgagtcgcatgcc
cacaaggccaacaaatcgtacgccctggaaggtcagaccaagggaaagaagccctcgcgt
cgctacaccaccgcagagaccaagggtctgctcaaggacatgcagcaagcagaagatgcc
aagaacgtcgtgcttaaggacctagcccgtcgcctcttcgagaagttctccaatcattat
gagcagtggaagcagtgcatcgactgtgtcgccaatctggatgtgttgggctccctggca
gagtacgccaggcaacagatgatcatctgcgtaccagagctggtctctggagtagatcag
ccgttcatcgaactgcaggagggctatcatccctgtgtgaatacctccacctatattccc
aatggcctggaattgggtaccaaaacggaagcccccctatccctgctcactggacccaat
atgggaggcaagagcaccttgatgagggaactgggtctactggtgatcatggcacagatt
ggcgctcacataccagcagccagctgtcgtctctccttggtggatagaattttcacgcgg
ctgggcgctcaagatgatattttggccgggcacagtacgttcttggtggagctgaacgag
acttctctcatactgaagcatgccacatgccattccctggtgctgctcgatgagttgggc
aggggcacggccacatacgatggcacagccattgccgcttctgtggtcaatttcctagcc
aatctcaagtgtcgcaccctcttttccacccactaccacaatctaatcgattacttccac
aacgaccagagggtcaccctcgggcacatggcttgcatggtggaaaatgaggataccaca
gatcccactcaggaaacggttacgttcctctacaagtacacggccggtgcttgtcccaag
tcgtacggcttcaatgcggccaaattggctggcatgccccagggcattataaagcgggcc
tttgagctctccaagaaagtggaggccattgccctgcaacgcaagattacggcaaagata
gtagcctcgtcgggagagaaggacttcaagcagcagaaactacatgcgttgaaggaccta
ctacagcagttgaaaatgtgccatgtctaa
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