Drosophila miranda: 108151422
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Entry
108151422 CDS
T06132
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
dmn
Drosophila miranda
Pathway
dmn03022
Basal transcription factors
dmn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108151422
09124 Replication and repair
03420 Nucleotide excision repair
108151422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmn03021
]
108151422
03400 DNA repair and recombination proteins [BR:
dmn03400
]
108151422
Enzymes [BR:
dmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108151422
Transcription machinery [BR:
dmn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108151422
DNA repair and recombination proteins [BR:
dmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108151422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
SWI2_SNF2
TniB
Motif
Other DBs
NCBI-GeneID:
108151422
NCBI-ProteinID:
XP_017135502
LinkDB
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Position
XR:complement(16150365..16153014)
Genome browser
AA seq
802 aa
AA seq
DB search
MGPPKKSKKDRSGGDKSSKKRRAEDEAFTQLVEDNDSLDAAESDGIPGAASKNAETNDEQ
VNTDEYGAKDYRGQMQLRPDHGNRPLWVAPNGHVFLESFSPVYKHAHDFLIAISEPVCRP
EHIHEYKLTAYSLYAAVSVGLQTHDIVEYLKRLSKTSIPEGILEFIRLCTLSYGKVKLVL
KHNKYFIESPHPEVLQKLLKDPVIQKCRLIRSEGEGFIQGTVDSKAITQFGTKLPPGADD
KATEDPAGAAAAAAGAASADGAAVVPDDITDFYEKIDKEEEDEDEANLKTVSFEVAQEKI
EVIQKRCIEIEHPLLAEYDFRNDTNNPDINIDLKPAAVLRPYQEKSLRKMFGNGRARSGV
IVLPCGAGKSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSMICRFTSEAK
DKPMGCGILVTTYSMITHTQKRSWEAEQTMRWLQEQEWGIMVLDEVHTIPAKMFRRVLTI
VQSHCKLGLTATLLREDDKIADLNFLIGPKLYEANWLELQKKGYIARVQCAEVWCPMSPQ
FYREYLTTKTSKKMLLYVMNPSKFRSCQFLIKYHEQRGDKTIVFSDNVFALKHYAIKMNK
PFIYGPTSQNERIQILQNFKFNSKVNTIFVSKVADTSFDLPEANVLVQISSHGGSRRQEA
QRLGRILRAKKGAIAEEYNAFFYTLVSQDTMEMSYSRKRQRFLVNQGYSYKVITHLKGMD
TDTNLMYGLQEEQAQLLQLVLSASDLDCEDEKLPGEPGYRPGGTTKRAGGLSSMSGGDDA
IYYEHRRKNVGSVHPLFKKFRG
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggggccgccaaaaaagtctaaaaaagatcgtagtggtggcgacaagtcaagcaagaag
cgccgcgctgaggatgaggctttcactcagctggtagaggacaatgacagcctggatgcc
gctgagtcggacggtataccgggtgcagcctccaagaatgctgaaaccaatgatgaacag
gtcaacacggatgagtacggagccaaagactatcggggacagatgcagctgcgtccagat
cacggcaatcgcccgctgtgggtggctcccaatggccatgtgtttctggaatccttctcg
ccggtctacaagcatgcccatgactttctcattgccatctcggagcccgtctgccgtccc
gagcatatacacgagtacaagctgactgcatacagtctatacgccgctgtctctgtgggc
ctgcaaacgcatgacattgtcgagtatcttaaacgcctgagcaagacaagtattcccgag
ggcatcctagagtttatacgtctgtgtacgctctcctacggcaaggtaaagttggttctg
aagcacaacaaatatttcatcgagtctccgcatccggaggtgcttcagaagctgctcaaa
gatccagttatacaaaaatgtcgcctcatacgcagcgaaggcgagggctttattcagggc
acagtggatagcaaggctattactcagtttgggacaaaactaccacctggagcagacgat
aaggcaacagaggatccggcaggtgcagctgctgccgctgctggagccgcatctgctgat
ggtgcagccgttgtgccagacgatattaccgacttctacgagaagatcgacaaggaggag
gaggacgaggatgaggcaaatctaaaaactgtctcgtttgaggtagcccaggagaaaatc
gaagttatccagaagcgctgcattgagatcgagcatcctctgctggctgaatatgatttc
cgcaatgataccaacaatccggatatcaacattgacttgaagcccgctgccgtcttgcgc
ccctaccaggaaaagagtctgcgtaagatgttcggcaacggacgtgcccgttcgggagtt
atcgtattgccctgtggtgccggaaaatctctggtaggtgtcacggcctgctgcacagtt
cgcaagcgagcccttgtgctgtgtaacagtggtgtttcagtggagcaatggaaacaacag
tttaagatgtggtctacagcggatgatagcatgatctgccgcttcacctcggaggcaaag
gataagcccatgggatgtggcattttggtaaccacatattccatgatcacacacacgcag
aaacgctcctgggaggcggagcagacaatgcgctggctgcaggaacaggaatggggtatt
atggtgctggacgaggtgcacaccattccagccaagatgttccgtcgtgtgctaaccatt
gtccaatcccattgcaaactgggcttgacggccaccctgcttcgcgaggatgacaagatt
gctgatctaaactttctcattgggcccaagttgtatgaggccaactggttggagttacag
aaaaagggctacattgctcgtgtgcagtgcgccgaggtctggtgccccatgtcgccacag
ttctatcgcgagtatctgaccacaaaaacgtccaaaaagatgctgctgtatgtcatgaat
ccttccaagttccgcagctgtcagttcctcattaaataccacgagcaaagaggcgataaa
accattgtcttctctgacaatgtatttgctctcaagcactatgccatcaagatgaacaag
cccttcatctatggcccgacctcgcagaatgagcgtatccagattctgcagaactttaaa
ttcaattccaaggtcaacacaatcttcgtgtcgaaagtggccgacaccagttttgatctt
cccgaggccaatgtgctcgtccaaatctcctcgcatggtggttcccgacgtcaggaggct
cagcgtttgggtcgtattcttcgcgctaaaaagggcgccattgctgaggagtacaacgcc
ttcttctacacactcgtctcgcaggacaccatggagatgagctactcccggaagcgtcaa
cgtttccttgtcaatcagggctatagctataaggttattactcatctcaaaggcatggac
acggacacgaacttgatgtacggcttgcaggaagagcaggcgcagcttctgcagctagtc
ctctctgcctccgatttggattgcgaggatgagaagctgccgggcgagcctggctaccgt
ccaggcggcacaaccaaacgggccggtgggctcagctccatgtcaggcggcgatgatgcc
atttactatgagcatcgtcgcaagaacgttggaagtgttcatcctttgttcaagaagttt
agaggatag
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integrated database retrieval system
