Drosophila miranda: 108151979
Help
Entry
108151979 CDS
T06132
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
dmn
Drosophila miranda
Pathway
dmn03013
Nucleocytoplasmic transport
dmn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108151979
03015 mRNA surveillance pathway
108151979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108151979
03041 Spliceosome [BR:
dmn03041
]
108151979
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108151979
Spliceosome [BR:
dmn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
108151979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
108151979
NCBI-ProteinID:
XP_017136433
LinkDB
All DBs
Position
XR:complement(19879761..19884041)
Genome browser
AA seq
992 aa
AA seq
DB search
MMFTGTNQQQDTRFSDKEKKLMKQMKFGDCLSKRVDMSKVKLDVLRPWISKKITDILNIE
DDVVVEFVYNQLEEEKYPCPKKMQINMTGFLNGKNARQFMGELWALLLSAQDSDSGIPAE
FIQQKKDEILKREEELQQRQRDRSRSRSRSSRGNSRRDRQRDRSPNGGKSKSRSRSRSRS
AKPANNGSVPSAAREAAANAAARIRKRGGSPSATRPASRERRPSRRPRSRSRQKTRSGSP
APGKKASSLDPPPAKALNGRHSGDKSPVQPKGKKSSRSRSRSRSPRSRSRSSGKRSRSRS
SSPRSRRRGRSSSISLSPERNQDQFEHRRNKNSVQNKRQYRNNRGDSASSMERGNDRGRQ
FGGGGGGGRRGRRFSPRGGNRSPMRQDNGGGVGGGGGRFQRSNSRRRSRSRRLSRSPMRY
SRSPRRFNNRRRSPMMHYRGGGGRGGGRGGGGGAGGGHRQMWQHRGGSPNMRGGGRIHWQ
ARYSPGGGGGGRGGGGMGRFDRRQSPHQNRYTRDHRPSDSQGGQPFRKFSPHSGPGRRFS
SPQRRSSRDRRPNSRERRGSPGGHVNRWDNPPPARNRRSTSESSAEPAGRQQRHRSASPA
ERRGRSHSRSHEKSRSHVRSRSRSSPRPSRKRDSPVAERSSVEFSGPAVNTIDLCREEQQ
QQHQQRKSNTETLKVIEQPTAAVRRSSYASLSRTPSPFLKPHERSAAAASAATAAVSVSK
AVPKKSRKSQTSSSDSSADSDDSDDQPARRKAQQKKLPAPVESAKSKSKSKSQRSSESSS
SSDQSDDDNSSIEDHLKKKKQQKQLQLQQQQLQQQQQQKVAAVKPDKRRSEKKLKRPTSS
AEESTGVEVEARPGSSRKRSHKKPRRTEGGDVSDSEEENVPKKKRKKSKKAADTSDSDSE
DSSKKKKHKKHKKHSKKSKKHKKHKRKSGSGKARPDSSSQASTDEEEQSGLAPKRNGKLP
LLIAGGTGPGGINEDLEKQLRERALKSMKKLD
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcacgggcaccaaccagcagcaggacactcggttcagcgacaaggaaaagaaa
ctaatgaaacaaatgaagttcggcgactgtctgagcaagcgcgtggacatgtccaaggtg
aagctggacgtgctacggccgtggatcagcaagaaaatcaccgacatactcaacatcgaa
gacgatgttgtggtggagtttgtatataaccagctggaagaggaaaagtatccatgtccc
aagaaaatgcaaataaatatgaccgggttcctcaatggcaaaaatgcccgccagtttatg
ggcgagctctgggctctgctgctctccgcgcaggacagtgactccggcatcccggctgag
ttcatacagcaaaagaaggacgagatactcaagcgcgaggaggagctacagcaacgccag
cgcgacagatcccgctcacgttctcgctcctcgcgcgggaattcccggcgggaccgtcaa
cgtgatcgatctccaaatggcggcaaatccaagtcccgctcccgttcgcgctcgcgatcg
gccaagccagccaacaatggctcggtaccaagtgccgcccgtgaggcggccgccaatgca
gcggctcgaattcgcaaacgcggcggctcaccctcggccacccgtcctgcctccagggag
cgacgtcccagccgccgcccacgttcccgctctcgccagaagacgcgctctggctcgccg
gcccctggcaagaaggcatcctccttggacccacccccagctaaggctctcaatggacgt
cactcaggggacaagtcccccgtacagcccaagggaaaaaagtcgtcgcgctcacgctcc
aggtcacgttccccccgtagtcgctctaggtccagcggcaagcgctcacgctctcgcagc
tcctcgccacgcagccgacgtcgtggccgctccagcagcatttctctgtcccccgagcgc
aatcaggatcagttcgagcatcgtcgcaacaagaacagtgtccaaaacaaacgtcaatat
cgcaataatcgcggggactcggccagctccatggagcgtggtaatgatcgcggacgtcag
tttggtggtggaggaggcggcggccgtcgcggaaggcgcttctcaccgcgcggcggtaac
cgcagtcccatgcgtcaggacaatggcggaggcgttggcggcggcggagggcgtttccag
cgttccaactcgagacgtcgctcacgttcccgtcgactttcccgttctcccatgcgatac
tctcggtcccccaggcgatttaataaccgccgtcggtcgcccatgatgcactatcggggt
ggaggaggtcgtggcggtggacgcggtggcggcggcggcgccggtggtggtcatcgccag
atgtggcagcatcgcggtggttcaccaaacatgcgtggcggcggtcgaatccactggcag
gcgagatacagtcctggcggcggcggtgggggacgaggtggcggtggaatggggcggttt
gatcgtcgccaatccccgcaccagaaccgctatacgcgcgatcatcgcccatcggactca
cagggaggacagcccttccggaaattttcaccccattccgggccagggcgtcgcttttcc
tcaccgcagcgtcggtcatcacgcgatcgccgccccaattctcgggaacgtcgcggctcg
cctggtggtcatgtcaatcgctgggacaatccgccaccggccaggaatcgacgatccacg
tcggagagctcagctgagccggccggacgccagcaacgacatcgcagtgccagtcccgct
gagaggcggggccgcagtcacagccgcagccacgagaaaagtcgcagtcatgtgagaagc
cgcagccgctccagtccgcgacccagccgcaagcgagacagtcctgttgctgagcgctct
tcggtggagttcagcggcccggccgtcaatactatcgatctctgtcgcgaggagcagcag
cagcagcaccagcagcgtaaatccaatacagaaacgctcaaggttatcgagcagccaaca
gccgcagtacgacgcagcagttatgccagcctgtcccgcactccatcaccgttccttaaa
ccgcacgagcgttcggcggccgctgcatcagccgctaccgccgccgtctccgtatccaag
gctgttccaaagaaatcccgcaagagtcaaaccagcagctccgacagcagcgccgacagt
gatgacagtgacgatcagccggcgcgccgcaaggcacagcaaaagaagctgccagctccc
gtggagtcggctaagtcaaagtcgaagtctaagtcgcaacgcagctcggagagctccagc
agcagcgaccagagcgacgatgacaactcgagcatcgaagatcatttgaaaaagaagaag
caacaaaagcagctgcagctgcagcagcagcagttgcagcagcaacagcaacaaaaagtg
gcggccgtgaagccggacaaacggcgctcggagaagaaactcaagcgccctacatctagt
gcagaggagtctacgggcgttgaagtagaggcaagaccaggaagcagtcgcaagcgtagt
cataagaaaccacgacgaactgagggcggagatgtcagcgactccgaggaggagaatgtg
cccaaaaagaagcgcaagaagtccaagaaggcggcggacacatccgacagcgactctgag
gactcgtcaaagaagaaaaagcataagaaacacaaaaaacacagcaagaaaagcaaaaaa
cacaagaagcataagaggaagagcggcagcggaaaggcccgcccggattccagctcccaa
gcaagcaccgacgaggaggagcagtcgggattggcgccaaagcgcaacggaaaactgccg
ctcctgatcgctggcggaaccggcccggggggcattaacgaagatctggagaaacaattg
cgggagcgcgcattaaaatccatgaagaagttggactga
DBGET
integrated database retrieval system
