Drosophila miranda: 108152216
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Entry
108152216 CDS
T06132
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dmn
Drosophila miranda
Pathway
dmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108152216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmn03041
]
108152216
03009 Ribosome biogenesis [BR:
dmn03009
]
108152216
Enzymes [BR:
dmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108152216
Spliceosome [BR:
dmn03041
]
Complex A
U1 snRNP components
U1 related factors
108152216
Complex B
108152216
Ribosome biogenesis [BR:
dmn03009
]
Eukaryotic type
Pre-60S particles
Helicases
108152216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
Utp25_C
Motif
Other DBs
NCBI-GeneID:
108152216
NCBI-ProteinID:
XP_017136881
LinkDB
All DBs
Position
XR:3758050..3764323
Genome browser
AA seq
794 aa
AA seq
DB search
MNMYNGQVNAYGGGAGAIGGMPPNRMGGPGGGAAGVGMFQRNRSAPYPGFAGPSNGGPRR
MNGTGQGPRMDHGFGGNQNNRTSTHGAHLPKIIWSEVNLTPFRKNFYKPCDTVLARTQGE
TESFLTNNEITIKGDQVPTPSIDFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIALSGR
DLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGS
NTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTTLKRCTYLVLDEADR
MLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLTNYIQVNIGSLTLSANHN
ILQIVDVCDESEKLGKLIKLLSDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIH
GDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRT
GRSNNTGTAYTLFTHSNANKANDLIQVLREANQEINPKLLSMSMSGGYKRGGGMGGGYRG
GNGYQGRNQQMGGGYNGGNNYRNNNASSGNMNRNGFNGGGGAPRFDQKPRTSPPNPGSNG
GYRPQGYQGYQGQQQQHQQQQQNGAAFSRFNPNAACFEPKAQSGPGAPQQANPQQQQQQP
LLPDAVAHAAMAAAANYGIDQKRSRFSPYNMNFSNMPPPPVNQQQHPQQQAQQPHQQQQA
AVAAGAAGGMPPQAYGQYSSMSSSMATVSLNGGPTSMPNSYRPQYAVPTQAAPYMMANSG
DIYAYPPPPLPVQN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgtataacggacaggttaatgcctacggaggaggggcaggtgcaataggcggc
atgccccccaatcgcatgggcggccccggcggcggagctgctggcgttggcatgttccag
cgcaaccgctctgccccttatcccggctttgccggacccagcaatggcgggccacgtcgc
atgaacggcactggacaaggtccacgcatggatcacggcttcggcggcaaccagaataac
cgcacctccacacacggcgctcatctgccgaagataatctggtccgaggtaaatctgact
ccgttccgcaagaacttctacaagccgtgcgatacggttctagccaggacacagggggaa
accgagagtttcctcacaaacaacgaaatcactatcaagggggatcaggtgcctacaccc
agtattgacttcgaggagggcggcttcccagactacgtgatgaacgagatccgtaagcag
ggctttgccaagccaactgccatccaggcccaaggttggccaatcgccttgagtggacgc
gatctggtgggtgtggcccagactgggtcaggcaagaccctggcctacgtgctgcccgct
gtagtgcacatcaacaaccagccgcgcctggagcgtggtgatggacccattgccttggtt
ctggctcccactcgcgagctggcccaacagatacagcaggtggccattgagttcggcagc
aacacccatgtgcgcaatacatgcatcttcggtggagcccccaagggacagcaggccagg
gacttagagcgtggcgtggagatcgtgattgccacaccgggacggctgatcgacttcctc
gagcgtggaaccactacgctgaagcgatgcacctacctggtgctggatgaggccgatcgc
atgctggacatgggattcgagcctcagattaggaagatcatgcagcagattcgtccggat
cgtcaggtgctgatgtggtcagccacctggcccaaggaagtgcgccagctggccgaggag
ttcctcacaaactacatacaggtcaacatcgggtcgctcacgctgagcgccaaccacaac
atactgcaaatcgttgatgtctgcgacgagagcgaaaagctggggaagctgatcaagctt
ctgtcggacatctcggccgaaaacgagaccaagaccatcatcttcgtggagaccaagaag
cgagttgacgagatcactcgcaatatctcgcgtcagggatggcgtgcatgcgccattcac
ggcgacaagtcgcagcaggagcgcgactttgtcttgtccagcttccgtaatggacgtcac
tcgatcttggtcgccacagatgtggctgctcgcggactggacgttgacgatgtcaagttc
gttataaactacgattatccttcgaactctgaggactatgtgcaccgcatcgggcgcacc
ggaagatcgaataacacgggcacagcatacaccttgttcacgcactcgaatgccaacaag
gccaatgatctgatccaagtcctccgcgaggccaatcaggagattaatccaaagctgctg
agcatgtccatgagcggaggctacaagcgcggaggtggaatgggcggcggttaccgcggc
ggcaatggctatcaaggtcgcaatcagcagatgggcggaggctacaacggcggcaataac
taccgcaacaacaacgccagcagcggcaacatgaatcgcaatggtttcaacggcggcggt
ggcgccccacgcttcgatcagaagccgcgcacatcgccacccaatccgggcagcaatggc
ggctatcgtccccagggctaccaggggtatcagggacagcagcaacaacatcagcagcag
cagcagaacggagctgccttctcgcgcttcaaccccaatgccgcttgtttcgaaccgaag
gcacagagcggcccaggtgcaccgcagcaagcaaatccacaacagcagcagcaacagccg
ctgctgcccgacgcagttgcccatgcagccatggcagcggctgccaactacggcattgac
cagaagcgctcccgtttctcgccgtataacatgaacttctccaacatgccgccgccacca
gtgaaccagcagcagcatccgcagcagcaggctcagcaaccacatcagcagcaacaggca
gcggtggctgccggagccgcaggaggtatgcctcctcaggcgtatggacagtattcctca
atgtcctccagcatggcgacagtttccctcaacggcggaccgacaagcatgcccaactcc
taccgcccccagtatgctgtgcccacacaggcggcaccctacatgatggccaacagcggc
gacatctacgcctaccctccgccaccgttgcccgtacaaaactaa
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