| Entry |
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| Name |
(RefSeq) probable helicase with zinc finger domain
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| KO |
| K25168 | helicase with zinc finger domain [EC:5.6.2.-] |
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| Organism |
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| Brite |
KEGG Orthology (KO) [BR:dmn00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:dmn03019]
108152384
Messenger RNA biogenesis [BR:dmn03019]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
108152384
3'-5' decay
Other 3'-5' decay factors
108152384
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
XR:complement(24496342..24506755)
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| AA seq |
2168 aa
MAAEKEMLAHDMVRRRNWARAVALYDQLISAAPGSAQAQATRSQKDQQIACLLGRCECLL
ELGKYEGCLADAYKVLTLLAEQTECLASVSRARRWLVHALFKMHKYGDAEIFLSKWINEL
SGQQIFSDISKTLERYKSIIQMIMNGQHKAQAQKIPHARLEDEMAILDTKLDHWATNNLP
LDKYSKLLSNKGLKKREQQQQQQQQQQQQQNGSGSGSGSYASSSSSSSTGSSSTMSSSNT
NLHKTNDLLAAMKLTAGKHQPASPDGPSLDAASGGDQAAPSTTCSYCAINFLTRNELRQH
CQTEAHQKVIMSDEGRDWKWRPPPRGYTLDTYSLCETFSDAHTCHYGAQCVEAHGQDELN
EWKERFEYRRMRVQKACEKELYGKSYTEQVLERWIQATAPERVMCERVPEIEAKCEQQLV
TSISSKTSKREWLFQLEAKQPLKAVALLQDAHRNHFALKSIKLGTASASAQVELKSDQEW
VAAAAAAAAAEAASGSEPAEGEEESSPPQQPAKLSHEVTVEFHTEIYGTFRQAICFDVGQ
EPLLVRHLCVDVLPVNDAEKIEEIKRDIINSSATRWDVANTQLTRFETTIGTHLKTEAYL
SDLDHERELLERYPCPRAATFTLTQSTIVEKRLTQNNYRSRIHELLYVEEIARYEQIARY
NVRTKLTVASNYILTPAGMATSTAKYSLAGELFALMRLGKDISEDTSPGRLILSNCCSVY
ISAPEEPGRKVSASSASSGSEQTRPVYEALIEDKGKNVIYLKLSAKCVEAMALQAETELD
VDIQFQLNRMPYCEWHNAVDKITDFRLIFPATELEPNIPWTPKKQWAEACEPKLNAKQRE
AVNAITTALSIKLPPILLIGPFGTGKTYTLAQAIKQLLAQPEAKILICTHSNSAADLYIK
EYLHPWIEEGLEEATPLRVYYHKRWSATVNGVVQKYCITDGVGNFKRPTLEDIMRHRIVV
VTLSISMELATLGLPKGLFTHIFLDEAAQAMECEAIMPLALANDSTRIVLAGDHMQMSPE
LFSAFAKERKLHISLLERLYDHYPSNFPCKILLCENYRAHEAIIRFTSELFYEQKLVASG
KQPRHERFYPLTFFTTRGEDVQDKNSTAFYNNAEVYEVVERVSELRKRWPSAWGKLNDTS
IGIMTPYADQVFRIRSELRKRRMGGISVERVLNVQGKQFRAVFLSTVRTRRTCMPQGSGP
GVPAAASIGDADTDYGFLSNSKLLNTAITRAQSLVAVVGDPVALCSIGRCRKVWERFIEI
CDEHKSLFGLTWSNLRSQLDGVELKRGYVLNPLAPEFVPRALQPEAYLRDQAALYLNGPQ
HGHGTHGPPGPPAHYASAAGMLGPGPAAAHQMNQMAAAMAANQQLSHMYSTHMAAMMAAA
AAVGGGKAANGPGPGPGPPPHYGGGGHMGMRGPPLNGAPQPPHLRGMPGPGPPGPPPPGA
GGPPPPPYNQYATMQHWRPPIAPQQQPGGQGQGQGPQPQNPNASLWGPPPQTNPWSVLPP
NKQQQQPPVTATGRGPGPGPGSLQPPPPNANPSLPLRGGSVPPPPPNAPPAAQLLRNPSE
LGYLAKKTLYNHGQAQPPPPPPHHLYGPPPPQQQAPPPMQGMQRGSSVPNGPMSPMENGP
PLPYLRHNGSGYNSYDKPLVPPQQQQQQQQPPFMYGAKQPSPSSLRFGPPSHDLLPPNVS
IYEMAFNPKEEQYKWYLKLLETVGQEGANKFADMLRQVMVTLQQQQQQQQQQQQGHQQQL
KQPPHQQMVNNPMLNNPHVMGGGGGQGQRPQYPMMYPQNQPQQPLQPQSVEASPPLENFN
HQIDLVFNSIMNGANDIAQPILRDVLGMVAGTASAPGAGPSLTNGLNALELQQQQQQQQQ
QQSRLFAIMQQQQQQQQQQAKIPPGPGPGLYAGHLAGGPPQGGGPGPGPGPGPHQPPPNS
SANNSNFMAVNPLLNDKPYNNPMNMHNNVGPNNAGVGVGVAGVPGTNSLLSNGNSVPLYR
RQALTGNGIGIGVGHGIGNSYNNMPGLDTGTNLIEALFHANNAVADHSVKSSDHVQGLLY
NNFSALKSGHEMDLFQSMPLPVPHSEANNHHHQHQQHQQASSAATTYAAVLSQGPQAASA
AGGAGQGQGQTQNQGQGQAQSQSQAQSQSQPAPAAKSSQAGGELQEKDPFAAIRELGQAT
TGFYNYFQ |
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| NT seq |
6507 nt +upstreamnt +downstreamnt
atggccgccgaaaaggagatgctggcccacgacatggtccggcgacggaactgggcccgg
gccgtggcgctctacgatcagctgatctccgcagcgcctggctccgcacaggcgcaggcg
acgcggtcgcagaaggatcagcagatcgcctgcctgctgggccgctgcgagtgcctgctg
gagctgggcaagtacgagggctgtctggccgatgcctacaaggtgctcaccctgctggcc
gagcagacggagtgcctggccagtgtctcgcgcgcccgtcgctggctagtccacgctctc
ttcaagatgcacaagtatggggatgccgagatatttttgagcaagtggatcaacgagctg
agcggccagcaaatattctcggacatatccaagaccctggagcgctacaagtccatcatc
cagatgataatgaacggccaacacaaggcccaggcgcagaagataccccacgcccggctg
gaggacgaaatggccatactggacaccaagctggaccactgggccaccaacaacctgccc
ctggacaagtacagcaagctgctcagcaacaagggcctcaagaagcgcgaacagcagcaa
cagcagcagcaacaacagcagcagcagcagaacggatcgggcagcggcagcggcagctat
gcgagcagcagcagcagcagcagcactggcagcagcagcaccatgtccagttccaacaca
aatctgcacaagaccaacgacctgctggcggccatgaagctcacggctggcaagcaccag
ccggcctcgccggatggccccagccttgatgcggcctccggcggggatcaggcggcgccc
tcgaccacttgcagctactgcgccatcaacttcctaacgaggaacgagctgcggcagcac
tgccagaccgaggcccatcaaaaggtgatcatgagcgatgagggacgagactggaaatgg
cggccgccaccccgcggctacaccctggacacgtacagtctgtgcgagacgttcagcgat
gcacacacctgccactacggggcccagtgtgtggaggcgcacggccaggacgagctgaac
gagtggaaggagcgcttcgagtaccggcgcatgcgggtgcagaaggcctgcgagaaggag
ctgtacgggaagtcgtacacggagcaggtgctggagcgctggatccaggcgacggcgccc
gagcgcgtgatgtgcgagcgagtgccggagatagaggccaagtgcgagcagcagctggtg
accagcatcagctcgaagacctccaagcgcgagtggctcttccagctggaggcaaagcag
ccgctcaaagcggtggccctgctgcaggacgcccatcgcaatcactttgccctcaagtcg
atcaagctgggcacggcctcagcttcagcccaggtggagctcaagtctgaccaggagtgg
gtggcggcagcagcagccgccgccgctgccgaagcagccagcggaagcgagccagcggag
ggagaggaggagtcgtcgccgccgcagcagcctgcgaagctcagccacgaagtaacagtc
gaatttcacacggaaatctatggaacgttccggcaggccatctgcttcgatgtggggcag
gagccgctgctggtgcgccacctgtgcgtggacgtgctgcccgtgaacgatgcggagaag
atcgaggagatcaagcgtgatataatcaacagctcggccacccgctgggacgtggccaac
acccagctgacgcgcttcgagacgaccatcggcacccacctgaagaccgaggcgtacctc
agcgatctggaccacgagcgggagctgctcgagcgctatccctgtccccgggcggccacc
ttcaccctcacccagtcgacgatcgtggagaagcgcctgacgcagaacaactaccggtcg
cgcatccacgagctgctctacgtggaggagatcgcccgctacgagcagatagcccgctac
aacgtccgcacgaagctgacagtggcctccaactacatactgacgcccgcggggatggcc
accagcacggccaagtactcgctggccggggaactgttcgccctgatgcggctgggcaag
gacatttcggaggacacctcgccgggacgcctcatcctctccaactgctgcagcgtgtac
atctcggcgccggaggagcccggcagaaaggtctctgcttcgtccgcctcctccggctcg
gagcagacgcggcctgtgtacgaggccctcatcgaggacaagggcaaaaacgtgatctac
ttgaagctgtcggccaagtgcgtggaggccatggccctgcaggcggagaccgagctggac
gtggacatccagttccagctgaaccgcatgccctactgcgagtggcacaacgccgtcgac
aagatcaccgacttccggctgatcttccccgccacggagctggagccgaacataccctgg
acgcccaagaagcagtgggccgaagcctgcgagccgaagctgaacgccaagcagcgggag
gcggtcaatgccatcaccaccgcgctgagcatcaagctgccgccgatcctcctgatcgga
ccgttcggcacgggcaagacctacacgctggcgcaggccatcaagcagctgctggcccag
ccggaggccaagatactcatctgcacgcactcgaactcggcggcggatctgtacatcaag
gagtacctgcacccgtggatcgaggagggcctggaggaggccacgccgctgcgcgtctac
taccacaagcgctggtcggcgacagtgaacggcgtggtccagaagtactgcatcacggac
ggcgtcggcaacttcaagcgccccacgctggaggacatcatgcggcatcgcatcgtggtc
gtgacgctcagcatcagcatggagctggccacgctgggcctgcccaagggcctgttcacg
cacatctttctggacgaggcggcccaggccatggagtgcgaggccatcatgccgctggcc
ctggccaacgactcgacgcgcatcgtcctggccggagaccacatgcagatgagccccgag
ctcttctcggcctttgccaaggagcgcaagctgcacatctcgctgctggagcggctctac
gaccactacccctcgaacttcccctgcaagatcctgctgtgcgagaactaccgcgcccac
gaggccatcatccgcttcacctcggagctcttctacgagcagaagctggtggcctccggc
aagcagccgcgccacgagcgcttctacccgctgaccttcttcaccacgcggggcgaggat
gtgcaggacaagaactcgaccgccttctacaacaatgccgaggtctacgaggtcgtcgag
cgggtctccgagctgcgcaagcgctggcccagcgcctggggcaagctcaacgacaccagc
atcggcatcatgaccccctacgcggaccaggtgttccgcattcgctccgagcttcgcaag
cgccgcatgggcggcatctctgtggagcgcgttctcaatgtccagggcaaacagtttcga
gccgtcttcctgtccacggtgcggaccagacgcacctgcatgccgcagggcagcggaccc
ggggttcccgccgccgccagcattggcgacgccgacacggactacggtttcctgagcaac
tcgaagctcctcaacacggccatcacgcgcgcccagtcgctcgtagcggtcgtgggcgat
cccgttgccctctgctcgatcggccgctgccgcaaggtctgggagcgcttcatcgagatc
tgcgacgagcacaagtctctgttcggcctgacctggtccaacctgcgctcccagctggac
ggagtggagctgaaacgcggctacgtgctcaaccccttggccccggagttcgttccgcgc
gccctgcagccggaggcctatctgcgggaccaggcggccctctatctgaacggaccccag
cacggacacggcacccacgggccgccgggtccaccggcccactatgccagcgcggccggg
atgctgggacccggaccggcggctgcccaccagatgaaccaaatggccgctgccatggcc
gcgaaccagcagctctcccacatgtactccacccacatggcggccatgatggccgcagcc
gccgccgtgggcgggggcaaggctgccaacgggcccggtccgggtccaggacctcctccc
cactatggtggaggggggcacatgggcatgcggggaccgccgctcaatggtgcgccccag
ccgccgcatctgcggggaatgcccggacccgggccgcctggaccacccccgccgggcgca
ggtggacctccaccgccgccctacaaccagtacgcaaccatgcagcactggcgtccgccc
attgcaccgcagcagcagccgggcggacagggccaaggacaagggccccagccgcagaat
cccaatgccagtctctgggggccgccgccgcagacgaatccgtggagcgtgctgcccccg
aacaagcagcagcagcagccaccggtgactgctacgggacgagggcccggcccgggtccg
ggatccctgcaaccgcccccaccaaatgcgaatccctcgctgccattgcgcggcggaagc
gtgccaccgccgccacccaatgctccgcccgctgcccagctgctgcgcaatcccagcgaa
ctgggctacttggccaagaagacactctacaaccatggccaggcgcagcctccgccgcca
ccgccccaccacctgtacgggccgccgccgccgcagcagcaggcgccgccgccaatgcag
ggcatgcagaggggcagcagcgtgcccaacgggcccatgagtcccatggagaacgggccg
ccgctgccctacctgaggcacaacggcagcggatacaacagctacgacaagccgctggtg
ccgccccagcagcaacagcagcagcagcagccgcccttcatgtacggagcgaagcagcca
tcccccagctcgctgcgctttggccctccctcgcacgacctgctgcccccgaatgtgagc
atctacgagatggccttcaaccccaaggaggagcagtacaagtggtacctcaagctcctc
gagactgtcggccaggagggggccaacaagttcgcggacatgctgcgccaggtgatggtc
accctgcagcagcagcagcagcaacagcagcagcagcagcagggccatcagcagcagctc
aagcagccgccccaccagcagatggtgaacaatccgatgctgaacaatccccatgtgatg
ggcggcggaggaggccagggccagaggccgcagtatcccatgatgtatccccagaaccag
ccgcagcagccgctccagccacagtccgtggaggcctcgccgccgctggagaacttcaat
caccaaatcgacttggtctttaactcgatcatgaacggagccaacgacatagcccagccc
atactgcgggacgtgctgggcatggtggccggcacggcaagtgcccccggcgcgggacct
tctctaaccaatggattgaatgccctcgagctgcagcagcagcagcaacagcagcagcag
cagcagagtcgcctctttgccatcatgcagcagcagcagcaacaacagcagcagcaggcg
aagataccgcctggcccgggaccgggtctgtatgccgggcatctagctggtgggccgcca
cagggaggagggcccggacctggacctggacctggaccacatcagcctccgcccaatagc
agcgccaacaactccaactttatggctgtcaatcctctgctcaacgacaagccctacaac
aacccgatgaacatgcacaacaacgtgggaccgaacaacgctggagtgggcgtgggagtg
gctggagttcccggcaccaattccctgctgagcaatgggaactcggtgccgctctaccga
cgccaggccctgaccggcaatggcattggcattggcgttggccatggcatcgggaacagc
tacaacaacatgcccggcctggacacgggcaccaatctgattgaggccctgttccacgcc
aacaacgccgtggcggatcactctgtgaagtcgtccgaccatgtgcagggcctgttgtac
aacaatttcagtgcgctaaagagcggccacgaaatggacctgttccagtcgatgccgctg
ccagtgccacactcggaggccaacaatcaccaccatcagcatcagcagcatcagcaggcc
tcttccgcggccaccacctatgcggcggtgttgagtcagggcccacaggcggcatcggcg
gctggtggagcgggtcaaggccagggccagacacagaatcaagggcaggggcaggcccag
tcgcagtcacaggcgcagtcgcagtcgcagcccgccccggcggccaaatcctcgcaggcg
ggcggcgagctgcaggagaaggatccgttcgcggccatacgggaactgggccaggccaca
accggattctacaactattttcagtga |
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