Drosophila miranda: 108152939
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Entry
108152939 CDS
T06132
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
dmn
Drosophila miranda
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmn03000
]
108152939
03036 Chromosome and associated proteins [BR:
dmn03036
]
108152939
Transcription factors [BR:
dmn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108152939
Chromosome and associated proteins [BR:
dmn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108152939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_7th_ZNF462
zf-C2H2_16
zf-met
zf-C2H2_jaz
zf-C2H2_ZNF462_1st
Zf-C2H2_ZNF451_C
zf-C2H2_REST
BolA
zf-C2H2_ZNF462
C2c1_WED-II
GAGA
GREB1_N
Motif
Other DBs
NCBI-GeneID:
108152939
NCBI-ProteinID:
XP_017138122
LinkDB
All DBs
Position
XR:8237681..8240651
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AA seq
793 aa
AA seq
DB search
MSKSSNKMSEDLQSFLNNLNKEIEDDKVVHKILKSIRAEDGVAEDDDDYIVEVSEEEQAE
NDDDYNPSEEEDDEDKYFIDDDGNCYVKTTPKKQKELQEKLKNLAKKPDKTTRSGASKPS
NKVINLRPAQSSPKMVTRSAAEPRPISVRATSAVAAADIPKLPAKTFANTARGRPKKSQK
VPSPKLEPKSDPLDIEREIEELVADEDVAAAVADITGNSEYTIDNAAVEALGNVADGEVY
EFDDNPPEESKPELKITSRQFLLKPVPTVEKKTAKVNQFNCSQCAYTTNKKFLITRHNKT
HETDFSFKCSICDRGFKSNVGLVNHVNTHLGNKPHKCKHCESAFVTSGELIRHTKYKHTK
EKPHKCTECSYASVELTKLRRHMTCHTGERPYQCPHCTYASQDTFKLKRHLVVHTGEKRY
QCDICKSRFTQSNSLKAHKLIHSVVDKPVFQCSHCPTTCGRKADLRLHIMNMHTADKPIP
CKRCGQNLPDRYQYKLHIKTHEGERCYRCKLCEYASVSQRHLDSHMLVHLDAKPFKCEVC
PQAFRQRQLLRRHMNLVHNEEYTRPEPREKMHSCPECPRIFTHKGNLIRHMEIHDETKNA
REERLKLKMGRNIRLQPDGSIVTLVNESDFDRGLIDMDDDDEENFELADVEPDNYEDEIL
EAMGTPTAKSKKSPVIINTQPRKSSINQPVIINRRLRAKGGTKTFHIKEEPNTSEFTVEL
QGDDGQVMVVELVNGDEEVVVKREPKGSKFNAANCFGFKDDDAEYADYGEQDSEMDGTSQ
EYLQLMDMIEQDA
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatcgtcgaataaaatgtctgaggatctgcagtcgttcctgaacaatttaaac
aaggaaatagaagacgacaaagttgtgcataagattttaaaatcaatcagagcggaggac
ggtgtcgccgaggacgatgatgattatattgttgaagtctctgaggaagaacaggcagaa
aacgatgacgactacaatccaagtgaagaggaggacgatgaggataaatacttcattgac
gatgacggaaactgctatgtcaaaactacgcccaaaaagcagaaagagctgcaggagaaa
ctcaagaacttagcaaaaaagcccgacaagaccacccgctcaggggctagtaagccgtcc
aacaaagtcatcaatttacgtcctgcccaatcttccccgaaaatggtcacaagatccgca
gcagagccaagaccaatcagtgtacgagcaacgagtgcagtagcagcagctgatattcca
aagctgccagcaaagacatttgctaacactgccaggggcaggcccaaaaagtcacaaaag
gttccctcaccgaagctcgagccgaagtccgatcccctcgacatcgagcgggagatcgag
gaactggtggctgacgaagatgttgcagctgccgtagccgatattaccggaaattcagag
tacaccattgataatgctgccgtcgaagccctgggcaatgtggctgacggcgaggtctat
gagttcgatgacaacccaccagaagagtccaagccggagctgaagatcacatccaggcag
ttcttactgaagcctgtgccaactgtggagaaaaaaacagccaaggtgaatcaattcaac
tgttcccagtgcgcctacacgaccaacaagaagtttctcatcacgcgccacaacaaaaca
cacgagactgacttttccttcaagtgctccatatgcgatagaggattcaagtcgaatgtg
ggattggtgaaccatgtgaacacccatttggggaataagccgcacaaatgcaagcactgc
gagagcgcctttgtcaccagtggcgagctgataagacacaccaaatacaagcacaccaag
gagaagccccacaaatgcacggagtgcagctacgcctctgtggagctgaccaagctaaga
cgccacatgacctgtcataccggagagcggccgtaccagtgtccccactgcacttatgcc
tcgcaggacacgttcaagctgaagcgtcatctcgttgtccacacgggggagaagaggtat
cagtgcgatatttgcaagtcccggtttacgcagtccaattccctgaaggcgcacaaactc
atccacagcgtcgtggataagcccgtgttccagtgcagccactgccctaccacctgtggc
cgcaaggcggacttgcgccttcacatcatgaatatgcatacggcagataaaccgataccc
tgcaagcgctgtggccaaaatctacccgatcgctaccagtataagttgcacataaagacc
cacgagggcgagagatgctatcgttgcaagctatgcgagtacgcctctgtttcccagcgg
catttggactctcacatgctcgtccacttggatgcgaagcccttcaagtgtgaagtatgc
ccgcaggccttccgtcagcgccagctgctgcgtcgccacatgaatctggtgcacaacgag
gaatacacgaggcccgagccgcgcgagaagatgcacagctgcccggagtgtccgcggatt
tttacccacaaaggaaatttgatacggcacatggagatccatgacgagacgaagaatgct
cgcgaggagcggctcaaattgaaaatgggtcgcaatattcgtctgcagcctgatggcagc
atcgtgaccctggtcaacgaaagtgactttgacagaggactcattgacatggatgacgac
gacgaggagaactttgaactggccgacgtggagccggacaactacgaggatgaaattcta
gaggccatgggcactcctacagcgaaatcaaaaaaaagtccggtcattatcaacacacaa
cccagaaagagctccatcaatcagcccgttatcattaaccgccgcctcagggccaaaggc
ggcaccaagacattccacattaaggaagagccaaacacctcagagttcacggttgaactg
cagggtgatgatggccaggtcatggtcgtggaactggttaatggcgacgaggaggtggta
gtcaaacgcgagcccaaaggctctaagttcaatgctgccaactgctttggctttaaggac
gatgacgccgaatacgctgattacggagagcaagactccgaaatggatggaacttcacag
gagtatctacagctaatggatatgatcgagcaagatgcttag
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