Drosophila miranda: 108154712
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Entry
108154712 CDS
T06132
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
dmn
Drosophila miranda
Pathway
dmn03030
DNA replication
dmn03410
Base excision repair
dmn03420
Nucleotide excision repair
dmn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108154712
03410 Base excision repair
108154712
03420 Nucleotide excision repair
108154712
03430 Mismatch repair
108154712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmn03032
]
108154712
03400 DNA repair and recombination proteins [BR:
dmn03400
]
108154712
DNA replication proteins [BR:
dmn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108154712
DNA repair and recombination proteins [BR:
dmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108154712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
AAA_14
AAA_30
Rad17
BRCT_2
AAA_33
RuvB_N
RCF1-5-like_lid
AAA_5
PTCB-BRCT
nSTAND3
AAA_18
AAA_17
AAA_16
DUF3855
NPHP3_N
TIP49
Motif
Other DBs
NCBI-GeneID:
108154712
NCBI-ProteinID:
XP_033246026
LinkDB
All DBs
Position
2:complement(24217244..24225163)
Genome browser
AA seq
1038 aa
AA seq
DB search
MQRNIDAFFKRLPGKTKKSDEEEQTPSKAPKRRKPMIISSDEEEIAASPQEPKKRKTSSK
TVCSDEDKVAASPDVSQAKKRVTNGVGGKKPSLSKLKPVQKVDPTQLFGGQTMRVEKPKQ
KTKAVIEFEDEDIDKSLMEVDFDESVRAAEPKENEKGRVAIAPKSPSRKRAKPGSPEPSK
SSSPKAPKPSKRISPEAAKPKSPEPPKRSSPDTPKSKAKAKTTTPRVKKEKPPADLETSV
LTDEERHERKRMSAVLYQKFKNRSACLNPGSKEIPKGTPDCLKGLTFVVTGVLESMEREE
AESVIKEYGGRVMKVVGKKLMYLVVGEEAGPKKLATAEELNVTILSEDGLFDLIREKSGQ
GKRQQVKEEIKSPKKEEKSESRPKKEEPKVKKEVKDQSLVKVEKMDSKVKKEKEESVPAV
ALKVKKEKEESVPAVAVKVKKEPTSIDTSQAQSRPVVKPLDLGSMAWVDKHKPTNIKEIV
GQAGAASNVTKLMNWLSKWYVSHDGKKKAQRPNPWAKNDDGSFYKAALLSGPPGIGKTTT
ATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLGNKSLYGYVNGQSQAVSKKHVLIMDE
VDGMAGNEDRGGMQELIALIKDSSVPIICMCNDRNHPKIRSLVNYCFDLRFQRPRLEQIK
GKIMSICFKEKVKISAAKVEEIIAATNNDIRQSINHISLMSAGEDIPTQSQAKVELKTAS
KDLKLGPWEVVRKVFSAEEHKRMSFADKCDLFFHDYSLAPLFVQQNYLQVTPQGNKKDIL
SKVAATADALSIGDMIDKRIRANSAWSLLPTQAFFSSVLPGEKMAGHFTGQINFPGWLGK
NSRTTKRARLAQELHDHTRSCTSGSRLSVRLDYAPFLLDNIARPLAKDGQDGVSAALDVM
KDYHLLREDLDSLVELTAWPGKKSPLDAVDGRVKAALTRSYNKEVMAYSYSAQANFKKKK
SEAGAADEELLGLEEDLEEGETNRVDSDEDEDKDNLELDGLIKAKKKSTAASTSKAASGS
KKSTAGSTAAKPKSRAKK
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaggaacattgacgcattcttcaagcggctgccaggcaaaacaaaaaaatccgat
gaagaagagcagacgccatcgaaggcgccaaaacgccgcaagcccatgattatatctagc
gatgaagaggaaatagccgcgagtccgcaggagccaaagaaacgcaagacgagcagcaaa
accgtatgcagcgatgaggacaaggtggccgccagtccagatgtatcgcaggcaaagaag
cgtgtcacaaatggtgttggaggaaagaagccatcgctttccaagctgaagccggtgcaa
aaggtggatcccacgcagctgtttggtggccagaccatgcgcgtggagaagccgaagcaa
aagacgaaggctgtcatcgagtttgaggatgaggatatcgataagagtctcatggaggtg
gattttgatgaaagcgtaagggcagcggaacctaaagagaacgagaaagggagagtggct
attgctcccaagtcgccctcgcgcaaacgagccaagcccggcagcccggagccgtcaaag
agtagcagtccaaaggcaccgaagccgtcaaagcgtatcagtccagaggcagcaaagccc
aagagtccggagcccccaaagcgcagcagtccggacacaccaaagtcgaaagctaaggcc
aagaccacgacgccacgtgtgaagaaggagaagccgccagcggacctcgagaccagcgtg
ttgaccgatgaggagcgccacgagcggaagcgcatgtcggcagtcctctaccagaagttc
aagaaccgcagcgcctgcctcaatcccggcagtaaggaaataccaaagggaacacccgac
tgcctgaagggtctcacgtttgtggtcaccggcgtgctggagtccatggagcgggaggag
gccgagtcggtgatcaaggagtacggcggccgtgtgatgaaggtggtgggcaagaagctc
atgtatctggtggtgggcgaggaggctggtccaaagaaattggccaccgcggaggaactg
aacgtgaccatcctgagcgaggatggactattcgatttgatcagggagaagtcgggacag
ggcaagaggcagcaggtgaaagaggagattaagagtccaaagaaggaggagaagagcgag
tccagaccaaagaaggaagagcctaaggtaaagaaggaagtgaaggatcaatcattggtc
aaagtagagaagatggattctaaggtgaagaaggagaaggaagagtctgtgccagcagtc
gccctcaaggtgaagaaggagaaggaagagtctgtgccagcagtcgccgtcaaggtgaag
aaagagccgacatccatagacacttcccaagctcagagcaggcccgttgtgaagccccta
gatctgggcagcatggcctgggtggacaaacacaagccgacgaacatcaaggagatcgtg
ggccaggccggagcagccagcaacgtgaccaagctgatgaactggctgtccaagtggtat
gtgagccacgatggcaagaagaaggcgcagcgacccaatccctgggccaagaacgacgat
ggtagcttctacaaggctgccctgctgtcgggaccaccaggaataggaaagacaacgaca
gctacgctagtggtcaaggaactgggcttcgatgcggtggagttcaatgcctccgacact
cggagcaagcgtctgctcaaggatgaggtatccacgctgctgggaaacaagtccctctat
ggctacgtcaatggacagtcgcaggcggtgtccaaaaagcatgtgctaatcatggacgag
gtggacggcatggctggcaacgaggaccgcggcgggatgcaggagctaattgcccttatc
aaggacagctccgtacccatcatttgcatgtgcaacgatcgcaatcacccgaagatccga
tctctcgtcaactactgctttgatctgcgcttccagcggccgcgtctcgagcagatcaaa
ggcaagatcatgagcatatgcttcaaggagaaggtcaagatctcggcggccaaagtggag
gagatcatagcagccacaaacaacgatattcgtcagtccatcaatcacatttccctgatg
agtgcgggagaagatattcccacccaatcgcaggctaaggtggagctgaagacggcctcc
aaagatctgaagctgggaccctgggaagtggtgcgcaaggtcttcagcgccgaggagcac
aagcggatgtctttcgccgataaatgtgatttattcttccacgactacagtctggcgcca
ctgtttgtccagcagaactatctccaggtcacgccacagggcaataaaaaggatattctg
agcaaagtggcagccactgcggatgcccttagtattggcgatatgatagataaacgaatc
cgtgccaactccgcctggagtctgctgcccacgcaggcatttttcagctctgttctcccg
ggagagaaaatggcaggccacttcacggggcagatcaacttccccggctggctgggcaag
aactcgcggaccacgaaacgggcgagactagcccaggagctgcatgatcacactaggtct
tgcacctccggctccaggctttccgtccggctggactacgctccctttctactggacaac
atagcccgtccgctggccaaagatggccaggatggagtgtccgctgcactggacgtaatg
aaggactaccacctgctgcgtgaggatctcgactcgctagtggagctgaccgcctggccg
ggcaagaagtccccgctggatgccgtggatggccgcgtgaaggcggccctgacgcggtcc
tacaacaaggaagtgatggcctattcctattccgcccaggcgaacttcaagaagaaaaag
tcggaggcaggtgccgccgatgaggagctgctgggcctggaagaggacctcgaggagggg
gaaaccaatcgcgtagactcggatgaggacgaggataaagacaacctagagctagatggc
ctgatcaaggccaaaaagaagtccacggctgccagcacgtcgaaggcagctagcggatcc
aagaagtcgaccgctggttcgacggccgccaagcccaagtccagagccaaaaagtaa
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integrated database retrieval system
