Drosophila miranda: 108154861
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Entry
108154861 CDS
T06132
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
dmn
Drosophila miranda
Pathway
dmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108154861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108154861
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108154861
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
Paf67
TPR_19
TPR_6
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
108154861
NCBI-ProteinID:
XP_017140777
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All DBs
Position
2:complement(1747089..1749548)
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AA seq
641 aa
AA seq
DB search
MDSADSPTKTQSSEDENYSLLCQAHEQFNNTEYDRCLELLQQLDTKGESSGPILRHNRAV
VNFYKSGCTQHATLLQELEELATDVKAPQGMGEAGGGLSLKQGASAATVARYNKAVIYYH
RHMYGTAQEKLAPLVARLEALEKAMSALVATLQLQLLLATNQLNRAEAFLDYLQYTLNLV
DKAPISNPDEVVPATATTAAATPSTVVAAQGSDAAVARVAGDTSGSLQLLQLLTHVLNRK
PVVITEDGTPHYAALRAQQYYIMKDFQMAAKQLMRINNECTQAGTVTPQLSTCIANNMGV
IHLRVRHYAIAAKFFQNALIFDKQLASNLRESTLQTMSSAHSCEILYNLGIALLHLRRPK
DAFQCLLVPVKQFHSNPRLWLRMAEACIMEHEANLAENERQSLAGAASPPSPRTYAPQSA
GVPEPTLEFAALCLRSALTLTLHHKASFHMDASQEETPEQREHAHQSWRQLQDNNFCNPS
KPVSLESLENMLAAIYAAHSFVSLRLGDHVTALDMAEHLLRGERLSDAHKLLGHMYAGEA
LMLMDKAAEARDHLDPTFVSSLDAFDLETRDWQLKSLDAAQNVVRYNLAVAMTLQNDYQQ
AKTFLATLTHSIVSNKAVALGRYIDLKLGAADNAVSAGALS
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggactcggcggattctcccacaaaaacgcaatccagcgaagatgaaaactacagctta
ctgtgccaagcccacgaacaattcaacaacaccgagtacgaccgctgcctggagctccta
cagcaactcgacacgaagggcgagagcagcggacccatcctgcggcacaatcgggccgtc
gtgaacttctacaagagcggctgcacccagcacgcgacgctgctgcaggagctggaggag
ctggccaccgacgtgaaggcaccccagggtatgggcgaggcaggtggcgggctgtccctg
aagcagggcgccagtgcggctactgtggccaggtacaacaaggcggtcatctattaccac
cggcacatgtatggcacggcccaggagaaactggctcctctggtggccagactggaggcg
ctggagaaggccatgtctgcgctggtggccacccttcagctgcagctgctgctggccacc
aaccagctgaaccgcgccgaggcctttctggactacttacagtacacgctgaacctggtg
gacaaggcgccgatcagcaatcccgatgaggtcgtcccggcgacagccacaaccgccgcg
gccacgcccagtacagtggtggctgcccagggctcggatgcggcggtggcacgcgtcgcg
ggggacaccagtggcagccttcagctgttgcagctcctgacgcatgtactcaatcggaaa
ccggtggtcataacggaggacgggacgccccattacgcggcgctaagggcgcagcagtac
tacatcatgaaggacttccagatggccgccaagcagctgatgcgcatcaacaacgagtgc
actcaggcaggcactgtaactccccagctgagcacctgcattgccaacaatatgggcgtc
atccacctgagagtgcgtcactatgctatagcggcgaagttctttcaaaacgccctgatc
ttcgataagcagctggcatcgaacctgagggagagcaccctccagacgatgagctcggcg
cactcgtgtgagatcctgtacaaccttggcatcgccttgctccatctgcgccgtccaaag
gatgcctttcagtgcctactcgtgcccgtcaaacagttccacagcaatccgcgactctgg
ttgcgcatggccgaggcttgcatcatggagcacgaggcaaacctggcagagaacgaacgt
cagtcgttagctggagccgcatccccgccttcacccaggacatatgcaccgcaatctgcc
ggcgtgccggagccaaccttagagtttgcggctctgtgcctgcgcagcgctcttaccctg
acgctgcaccacaaggccagctttcatatggatgcctcgcaggaggagacccctgagcag
agggagcacgcgcatcagtcgtggcgccagctgcaggacaataatttttgcaacccatcg
aaaccggtcagcctggaatcgcttgaaaacatgctggccgccatctatgcggcccacagc
ttcgtctcgctgcgcttgggggaccatgtgacggcactggacatggccgagcacctcctg
cggggcgagcgtctttcggatgcacacaaactgctgggccatatgtacgcaggcgaggcg
ctgatgctgatggacaaagctgcggaggcacgcgaccatctggatccgacattcgtcagc
tctctggacgccttcgacctggagacgcgcgactggcagctaaagtcgctggacgcggcc
cagaatgtagtgcgatacaacctggccgtggccatgaccctgcagaacgactaccagcag
gcgaaaacctttctagccacactcacccactcgattgtgagcaacaaggcggtggcgctg
ggtcgctatatagacctcaagctgggagcagccgacaacgccgtttccgctggagcgctc
agttag
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