Drosophila miranda: 108155277
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Entry
108155277 CDS
T06132
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
dmn
Drosophila miranda
Pathway
dmn03013
Nucleocytoplasmic transport
dmn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108155277
03015 mRNA surveillance pathway
108155277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108155277
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108155277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
108155277
NCBI-ProteinID:
XP_017141473
LinkDB
All DBs
Position
2:4034208..4037631
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AA seq
833 aa
AA seq
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MAEVEKMTAAPPTDIPVSSPNASEAGGGSSSTAELGTSPNQEPSSNSHPHDSEYDTASDL
EGGEDYDDDDDESGSEEDSETDEDDVGSETTEDDRHSGTVSGNDNCQDRSVADSEAQKKV
DEDRSNPQYIPKRGTFYEHDDRTAETEGCLVPETENSSQVAPESNGEVNGVSASGTTPSG
QPPAISQASKTMKQWQPASGGDRWSHDRFEASEQAPKSRSELMHSYGYDIRNEDCAPRAR
RRRRYTRGPSKYSRNWEDEQAYLKASNKERKPPRPQDFPALNERKPRGPRTSSFREEKEN
RRSERGADKPQGGGGGSAGGASVSNPAPRAQEVERERERGDRDREREPKNRNYGRVNGGP
GRQNPMEFKPKSNRGPPPDRRERNERGDRGERERERDREQEHVDQRNERAHQKPSTPRSN
GQGRQSTDGPILQQSQQQPPQQQQPRQSPQQVQPPPLAAPQTQLSTTNLSQRLQQVQQRN
DPSHVGSVQMHSLANQNQQQKQLQLTQQAQPAVPEPRTAPKRYSSLRRSQQEASQHLAEQ
QQQQQLQQQLHLQQQQQQQQQQQPSQIMIQDPHVLMQFAYQQQEIQAQLQTLQLGPAAAA
VPAPPKQHAPPAAAYPQAQAAPYYVTGTDPVPVPVPVQVPVSVTVPPASPYVNPASAAYL
PTTPAAVAFAQAQTSVVTQPQPQPPAQAQPPAAVAGQATPSMNFHQNYNTVGGTTYFVPP
VQTTSRPAALPQRRPTNAIPILPPSEKHKARPGGLAGPNANQTTNAKEEGGHTDNIDHII
DNMFVQRPAFQPPATGEAAAAGAKEDVANSNPILPALAAAEQNLQPVPAVGQE
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagtagagaaaatgactgcggctccgccgaccgatatacccgtctcatcacca
aatgccagtgaagcggggggtggtagcagcagcacagccgaactggggacatcccccaac
caggagccgtcgagcaactcccatccccacgactccgagtacgacactgccagcgatctg
gagggcggtgaggactacgatgacgacgacgacgagagcggcagcgaggaggattcggag
acggatgaggacgatgtgggcagcgagaccaccgaggatgataggcacagcggcacggtc
agcggcaacgacaattgccaggacagatctgtggccgacagcgaggcgcagaagaaagtc
gacgaagatcgcagcaatccgcagtacataccgaaacgcggcaccttctatgagcacgat
gaccgcacggccgaaaccgagggctgcctggtccccgagacggagaacagctctcaggta
gcaccagagtcaaacggtgaagtcaacggggtctctgcctcgggcaccacacccagtgga
cagccaccagccatatcgcaggcttccaagaccatgaagcagtggcagccggcctctggt
ggcgaccgctggtcccatgataggttcgaggccagcgaacaggcccccaagtcgcgctcg
gagctcatgcattcctatggctatgacatacggaatgaggattgtgcaccacgtgcccga
cgtcgcagaaggtacacgcgtggccccagcaagtactctcgcaactgggaggacgagcag
gcgtatctgaaggccagcaacaaggaacgcaagccaccccgacctcaggacttcccggca
ctaaatgagcgaaagccgcgtggcccacgcacttcctccttccgggaggagaaggaaaat
cgccgctcagaacgcggtgccgacaaaccacaaggaggcggaggtggaagtgcaggcggt
gcgagcgtctcgaatcccgccccacgagctcaggaagtagagcgcgagcgtgaacgtgga
gatcgggatagggagcgtgagccaaagaaccgcaactatgggcgcgtgaatggcggtccg
ggtcgacagaatcccatggagtttaagccaaagtcaaatcgtggtcccccgcccgaccgt
cgtgagcgtaatgagcggggagaccggggagaacgtgagcgcgagcgcgaccgtgagcag
gagcatgtggatcagcgcaacgagcgtgctcatcagaagccatctactcccagatcaaac
ggacagggcaggcagtcgacggatggcccaattcttcagcagagccagcaacagccgccg
cagcagcagcagccgagacagtccccacagcaggtgcagccgcctccactggcggcgccc
cagactcagctttcgaccactaatttgtcgcagcgactgcagcaggtgcagcagcgcaac
gaccccagtcatgtaggaagcgttcagatgcattctctggccaaccagaaccaacagcag
aagcagctgcagctaacgcagcaggcacagccggcagtcccagagccaaggactgcaccc
aaacgatactccagtctccgtcgctcccagcaggaggcatcccagcacttggcagagcag
cagcagcaacaacaactgcagcagcagcttcatcttcaacagcagcagcaacagcaacaa
caacagcagccctcacagattatgatacaggatccccatgtcctgatgcagtttgcctat
cagcagcaagagattcaagcccaactccagacactgcaactgggaccggcagcagcggcc
gtgccagcgccaccaaagcaacatgccccgccagcggcagcctatccccaggcacaggcg
gcaccctattatgtgactggaacggatccggtgccggtgccggtgccggtgcaggtccca
gtttcggtgactgtacccccagcttccccctatgttaatccggcgagtgccgcctacttg
cccaccacaccggcagctgtggcctttgcccaggcccagacgtccgtggtgacgcagcca
cagccacagccgccggcccaggcgcagccgccagctgcggtggctggccaggcgacaccg
tccatgaacttccatcagaactacaatacggtcgggggcacaacctactttgtgccgcct
gtccagaccaccagccgacccgctgccttgccccagcgtcgacccaccaatgcgattccc
attctaccgccatccgagaagcataaggcgcgacccggaggattagcagggccaaatgcc
aaccagacgaccaatgccaaggaggagggcgggcacacagacaacattgaccacatcatt
gacaacatgtttgtacagcggcctgcattccagccgccggccactggagaggctgcggct
gcgggtgccaaggaggatgtggccaatagcaatcccatccttccggcactggcggcagcc
gaacagaacctccagcctgtgccggctgttgggcaggaatga
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