Drosophila miranda: 108155340
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Entry
108155340 CDS
T06132
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
dmn
Drosophila miranda
Pathway
dmn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108155340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmn03021
]
108155340
Transcription machinery [BR:
dmn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
108155340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
DUF3874
Motif
Other DBs
NCBI-GeneID:
108155340
NCBI-ProteinID:
XP_017141584
LinkDB
All DBs
Position
2:complement(22228129..22230239)
Genome browser
AA seq
578 aa
AA seq
DB search
MSSASKSTQSAAASGSSSSSSNSSTSAATASASSSNVQEFKIRVPKMRKKHHVMRFNATL
NVDFAQWRNVKLERENNMKEFRGMDEDQPKFGAGSEYNRDQREEARRKKFGIIARKYRPE
AQPWILKVGGKMGKKFKGIREGGVGENAAFYVFTHAPDGAIEAYPLNEWYNFQPIQRYKS
LSAEEAEQEFGRRKKVMNYFSLMLRKRLRGDEEEEQDPEEAKLLKAATKKSKELKITDMD
EWIDSEDESDSEDEEEKKKKEQEDSDDGSKKAKGGKGKKGADKKKKKRDVDDEAFEESDD
GDEEGREMDYDTESSEDEPDPESKLDKDMKGVAEEDALRKLLTSDEEDEDEKKSDESDKD
EADGEKKKKEKNKEEASKDKKKKKPSKDDKKAKANGSGGDSSTDFSTDSTDSEDDLSNGP
PKKKVVPKDKEKEKEKESATNNKPSTSSNANKSRSSTPTPANNDVSKRKMNSLPSDLTGS
DTSNSPTSTPAKRTKNEISTSLPTSFSGSKVEDYGITEEAVRRYLKRKPLTATELLTKFK
NKKTGVSSDRLVETMTKILKKINPVKHTIQGKMYLWIK
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgcatcaaagtccacacaaagcgccgccgccagtggcagcagcagcagcagc
agcaacagctccacgtctgcagcaacggcgtcagcatcctcgtcgaatgtccaggagttt
aagatccgggtgcccaagatgcgaaaaaagcatcatgttatgcgtttcaatgccacactg
aatgtggatttcgcccaatggcgaaatgtgaaactggagagggaaaacaatatgaaggag
tttcgagggatggatgaggatcagcccaagtttggggccggttccgagtacaatcgagat
cagcgcgaggaggcacgccgcaagaagtttgggatcatagcgcgcaagtacaggccggag
gctcagccctggatattgaaagtcggtggcaagatggggaaaaagttcaagggcattcgg
gagggcggtgtgggtgagaatgcagcattctatgtgttcacccatgccccggatggtgcc
atcgaggcgtatcccctgaacgagtggtacaatttccaacccattcagagatacaaatct
ctgtcggcggaggaggcggagcaggagttcggtcgtcggaagaaggtcatgaactacttc
tcgcttatgttgcgcaagcgtttgcgtggcgacgaggaggaggagcaggatccggaggag
gcaaaactacttaaggcagcgaccaaaaagtcaaaagagctaaaaatcaccgacatggac
gagtggatcgattccgaggacgagtccgactcggaagacgaggaggagaagaagaaaaag
gagcaggaagacagcgacgatggcagcaagaaggccaaggggggcaagggcaaaaagggc
gccgacaaaaagaagaaaaagcgcgatgtggacgacgaggcgttcgaggagtcggacgat
ggcgatgaagagggtcgtgaaatggactacgacaccgagtccagtgaagatgaacccgat
cccgaatccaagctggacaaggacatgaaaggcgttgcagaggaggatgctctacggaag
ctgcttacatcggacgaggaagatgaagatgagaagaagtcggatgagtcggacaaggat
gaggcggatggtgagaaaaagaagaaggaaaagaataaagaagaagcctctaaggacaag
aagaagaagaaaccctcgaaggatgacaaaaaggcgaaggcaaacggcagcggtggcgac
tcctccacggacttcagtacggacagcacagactccgaggatgatctcagcaatgggcca
cccaaaaagaaggtcgtccccaaggacaaagaaaaggagaaggaaaaggagagtgccacc
aacaacaagccatcgaccagcagcaatgccaacaaatcgcgctcttccacgcccacgcca
gcgaacaacgatgtcagcaaacgcaagatgaacagcctgcccagcgatctcactggctcg
gacaccagcaacagtccaaccagcacgccggccaagcggaccaaaaacgaaatcagcact
tcgctgcccacatccttctctggcagcaaagtggaggactatggcataaccgaggaggca
gtgcggcggtatctcaagcgtaagccgttgactgccaccgagctgctgaccaagttcaag
aacaaaaagactggcgtctcgagcgatcgccttgtggagaccatgacgaaaatattgaag
aaaatcaatcccgtgaagcacaccatccaaggaaagatgtatttgtggataaaatag
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