KEGG   Drosophila miranda: 108155376
Entry
108155376         CDS       T06132                                 
Name
(RefSeq) exosome component 10
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dmn  Drosophila miranda
Pathway
dmn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dmn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108155376
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmn03019]
    108155376
Messenger RNA biogenesis [BR:dmn03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     108155376
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-GeneID: 108155376
NCBI-ProteinID: XP_017141637
LinkDB
Position
2:complement(8207794..8211404)
AA seq 906 aa
MQRLLKRKQEDQAEDDQPEQPDQPPKIESAPAPDSGIGDIKDFTKQAFKNVVAATRACNS
FPQGTARSLYLGYPGYSRVIDDLSQRLIGLIGNVMQAEEIKDDIKKRHTEEQFEMVQECN
DIIFERITTNLDIKAGQRRKPHMVLETQVDVMSPSTPAATAPAEFAKSETPKAGSWNRWP
PTPQRNVLSARLFAAKNIMRPQMNFKTPVDNSDQNPFVPRLKEKPNSLKPLALLPEYDEA
GNVHAYLHPYEFELMKLEPSAEQLQRQTPLLPAPPAATELMLVDSVEKLSQALEELRRAP
HIAIDVEHHSYRTFMGITCLVQMSTRTKDYIFDSLALREEMHVLNLVLTDPKKVKILHGA
DQDIEWLQRDLSLYVVNMFDTHRAAKALNMARLSLAFLLKHYVDLDVDKSLQLADWRMRP
LPQQLIDYARQDTHYLIYVYERMTNDLLQAEQGQSQALLTVYQLSTEVCKKRYTKPHVGP
ESHLDLVRKTKRSFDNRQLHALRGIFQWRDATARQEDESYGYVLPNHMMLQIAESLPREM
QGILACCNPIPPLVRQQLHALHQIVLKAREQPLVKPILEARSQPQVLPPTSKDYGNKLYC
PHDFTHLEETRDDLPTLLNRNASGKLQLPAEEEQPRDDVPLAVPALTLFAKPTASTPDEE
MRLVHLRKESQVLRMPYKRYLAILPLMEQVKADQRARESKELLKRRLCPPATPTEDIKLE
SSPGKVEAADDAVYSLPLKEQLKRKHKPDSDQHPSTSKRLKEGNIKPKPESVPVRGVVKN
ESITCISDEDDDVVEVPIQKKPIPQAAEAPSKRQQKRQQFQRFRGGKARGNHPQSSSQPV
VQQPKPQGNNFDYKNVDFRQFQGGAQRARGTEIKQTIRGKNRPNNRNNKQFNKLFTFSNV
RKDGKK
NT seq 2721 nt   +upstreamnt  +downstreamnt
atgcagcgtttattgaaaagaaaacaggaggatcaggcggaggatgatcagcctgagcag
cctgatcagccgccgaaaatagaatcagcgccagcaccagacagtggcattggcgatatt
aaagatttcacaaagcaagcctttaagaatgtggtggccgccacacgtgcctgcaactcc
tttccacagggaaccgcccgctccctatatctcggctatccggggtattcgcgtgtcata
gacgatctgtcccagcggctaatcggcctcataggaaacgtgatgcaggccgaagagatc
aaggacgacattaaaaaacgccacacggaggaacagttcgaaatggtccaggagtgcaac
gatataatcttcgagcgtattacgacgaatctggacatcaaagctggccagcggaggaaa
ccacacatggtgctggagacgcaggtggatgttatgagcccctccacgccagcggcgacg
gcaccagcagagttcgccaagtcggaaaccccaaaggcgggaagctggaacaggtggccg
cccacgccgcagcgtaacgtgctctccgctcgcctgttcgcagccaagaacataatgcgg
ccccagatgaatttcaagacgccagtggacaacagtgatcaaaatccgtttgtgccacgc
ctcaaggagaagccaaactccttgaagccgctggcactgctgccagagtacgacgaggcg
ggcaatgtgcatgcctatctgcatccgtacgagtttgagctgatgaagctggaaccgtcg
gcggagcagctccagaggcagacgcctctgctgcctgctccgcccgcggctaccgagctg
atgctcgtcgacagtgtggaaaagttaagccaggccctggaagagctgcgacgggcgccc
cacatagccatcgatgtggagcaccactcgtatcgcacattcatgggcatcacctgcttg
gtgcagatgtccacccgcaccaaggactacatattcgacagtctcgcgctgcgcgaggag
atgcacgtcctgaacctggtactaacggatccaaagaaggtgaagatcctccacggcgct
gaccaggacatcgagtggttgcagcgcgatctttcgctgtacgtcgtcaacatgttcgac
acccatcgggcggctaaggccctaaatatggctcgcctgtcgctggcttttctcctcaaa
cactacgtggacctggacgtggacaagagcctccagctggccgactggcgcatgcggccg
ctgccccagcagcttatcgactacgctcgccaggacacgcattatttgatttacgtgtac
gagcgtatgaccaacgacctgctacaggccgagcaaggacagtcgcaggccctgctcacc
gtctaccaactgagcacggaggtgtgcaagaagcgctacacgaaaccccacgtcggaccc
gaatcgcatctcgatctggtgcgaaagacgaagcggtccttcgacaatcgacagctgcac
gccttgcgtggcattttccagtggcgggatgcgactgcgcgccaagaggacgagagctac
ggctatgtgctgcccaatcacatgatgctccagattgccgagagcctgccccgggagatg
cagggcattctcgcctgctgcaatcccataccgccgctggtgcgccagcagctgcacgcg
ctccaccagatcgtgctgaaggcgcgcgaacagccgctggttaaacccattctggaagcc
cgcagccaaccgcaggtcctgccacccaccagcaaggactacggcaacaaactctactgt
ccgcacgacttcacgcacttggaggagacgcgcgatgacctgcccacgctgctcaaccgc
aacgcgtcgggaaagctgcagctgccagcggaggaggagcaacccagagacgatgtcccc
ctggcggtgccggccctgactctgttcgcgaagccaaccgcttccactccggacgaagag
atgcgtctggtgcacttgcgcaaggagagccaggtgctgcgcatgccctataaacgctac
ctggccatccttccgctcatggagcaggtgaaggccgaccagcgggcacgggaaagcaaa
gaactgctcaagcgtcgtctctgcccgccagcgaccccgacagaggacatcaaattggag
tcctccccaggtaaggtcgaggcggcagatgatgccgtctacagcctgccgctaaaggaa
cagctgaagcgtaagcacaaacccgactctgaccagcatcccagcaccagcaagcgattg
aaggaggggaacatcaaacccaagccagagtcagtgccagtgcgaggagtagtgaagaac
gagtcaataacctgcatcagtgacgaggacgacgatgtcgtagaagttcctatacagaaa
aagcccataccacaggcagcggaagcaccgagcaagcgccagcagaagcgtcagcagttc
cagcgcttcagggggggcaaggcacgtggcaatcatccccagagctccagtcaaccggtg
gtccagcagcccaagccacaaggcaacaactttgactacaagaacgtggacttccggcag
ttccagggcggagcacaacgagcccgtggcacagagatcaagcagacaatacgcggaaag
aatcgtcccaacaatcggaataacaagcagtttaacaagctttttacatttagtaatgta
aggaaagatggcaagaaatag

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