Drosophila miranda: 108155376
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Entry
108155376 CDS
T06132
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dmn
Drosophila miranda
Pathway
dmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108155376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108155376
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
108155376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
108155376
NCBI-ProteinID:
XP_017141637
LinkDB
All DBs
Position
2:complement(8207794..8211404)
Genome browser
AA seq
906 aa
AA seq
DB search
MQRLLKRKQEDQAEDDQPEQPDQPPKIESAPAPDSGIGDIKDFTKQAFKNVVAATRACNS
FPQGTARSLYLGYPGYSRVIDDLSQRLIGLIGNVMQAEEIKDDIKKRHTEEQFEMVQECN
DIIFERITTNLDIKAGQRRKPHMVLETQVDVMSPSTPAATAPAEFAKSETPKAGSWNRWP
PTPQRNVLSARLFAAKNIMRPQMNFKTPVDNSDQNPFVPRLKEKPNSLKPLALLPEYDEA
GNVHAYLHPYEFELMKLEPSAEQLQRQTPLLPAPPAATELMLVDSVEKLSQALEELRRAP
HIAIDVEHHSYRTFMGITCLVQMSTRTKDYIFDSLALREEMHVLNLVLTDPKKVKILHGA
DQDIEWLQRDLSLYVVNMFDTHRAAKALNMARLSLAFLLKHYVDLDVDKSLQLADWRMRP
LPQQLIDYARQDTHYLIYVYERMTNDLLQAEQGQSQALLTVYQLSTEVCKKRYTKPHVGP
ESHLDLVRKTKRSFDNRQLHALRGIFQWRDATARQEDESYGYVLPNHMMLQIAESLPREM
QGILACCNPIPPLVRQQLHALHQIVLKAREQPLVKPILEARSQPQVLPPTSKDYGNKLYC
PHDFTHLEETRDDLPTLLNRNASGKLQLPAEEEQPRDDVPLAVPALTLFAKPTASTPDEE
MRLVHLRKESQVLRMPYKRYLAILPLMEQVKADQRARESKELLKRRLCPPATPTEDIKLE
SSPGKVEAADDAVYSLPLKEQLKRKHKPDSDQHPSTSKRLKEGNIKPKPESVPVRGVVKN
ESITCISDEDDDVVEVPIQKKPIPQAAEAPSKRQQKRQQFQRFRGGKARGNHPQSSSQPV
VQQPKPQGNNFDYKNVDFRQFQGGAQRARGTEIKQTIRGKNRPNNRNNKQFNKLFTFSNV
RKDGKK
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtttattgaaaagaaaacaggaggatcaggcggaggatgatcagcctgagcag
cctgatcagccgccgaaaatagaatcagcgccagcaccagacagtggcattggcgatatt
aaagatttcacaaagcaagcctttaagaatgtggtggccgccacacgtgcctgcaactcc
tttccacagggaaccgcccgctccctatatctcggctatccggggtattcgcgtgtcata
gacgatctgtcccagcggctaatcggcctcataggaaacgtgatgcaggccgaagagatc
aaggacgacattaaaaaacgccacacggaggaacagttcgaaatggtccaggagtgcaac
gatataatcttcgagcgtattacgacgaatctggacatcaaagctggccagcggaggaaa
ccacacatggtgctggagacgcaggtggatgttatgagcccctccacgccagcggcgacg
gcaccagcagagttcgccaagtcggaaaccccaaaggcgggaagctggaacaggtggccg
cccacgccgcagcgtaacgtgctctccgctcgcctgttcgcagccaagaacataatgcgg
ccccagatgaatttcaagacgccagtggacaacagtgatcaaaatccgtttgtgccacgc
ctcaaggagaagccaaactccttgaagccgctggcactgctgccagagtacgacgaggcg
ggcaatgtgcatgcctatctgcatccgtacgagtttgagctgatgaagctggaaccgtcg
gcggagcagctccagaggcagacgcctctgctgcctgctccgcccgcggctaccgagctg
atgctcgtcgacagtgtggaaaagttaagccaggccctggaagagctgcgacgggcgccc
cacatagccatcgatgtggagcaccactcgtatcgcacattcatgggcatcacctgcttg
gtgcagatgtccacccgcaccaaggactacatattcgacagtctcgcgctgcgcgaggag
atgcacgtcctgaacctggtactaacggatccaaagaaggtgaagatcctccacggcgct
gaccaggacatcgagtggttgcagcgcgatctttcgctgtacgtcgtcaacatgttcgac
acccatcgggcggctaaggccctaaatatggctcgcctgtcgctggcttttctcctcaaa
cactacgtggacctggacgtggacaagagcctccagctggccgactggcgcatgcggccg
ctgccccagcagcttatcgactacgctcgccaggacacgcattatttgatttacgtgtac
gagcgtatgaccaacgacctgctacaggccgagcaaggacagtcgcaggccctgctcacc
gtctaccaactgagcacggaggtgtgcaagaagcgctacacgaaaccccacgtcggaccc
gaatcgcatctcgatctggtgcgaaagacgaagcggtccttcgacaatcgacagctgcac
gccttgcgtggcattttccagtggcgggatgcgactgcgcgccaagaggacgagagctac
ggctatgtgctgcccaatcacatgatgctccagattgccgagagcctgccccgggagatg
cagggcattctcgcctgctgcaatcccataccgccgctggtgcgccagcagctgcacgcg
ctccaccagatcgtgctgaaggcgcgcgaacagccgctggttaaacccattctggaagcc
cgcagccaaccgcaggtcctgccacccaccagcaaggactacggcaacaaactctactgt
ccgcacgacttcacgcacttggaggagacgcgcgatgacctgcccacgctgctcaaccgc
aacgcgtcgggaaagctgcagctgccagcggaggaggagcaacccagagacgatgtcccc
ctggcggtgccggccctgactctgttcgcgaagccaaccgcttccactccggacgaagag
atgcgtctggtgcacttgcgcaaggagagccaggtgctgcgcatgccctataaacgctac
ctggccatccttccgctcatggagcaggtgaaggccgaccagcgggcacgggaaagcaaa
gaactgctcaagcgtcgtctctgcccgccagcgaccccgacagaggacatcaaattggag
tcctccccaggtaaggtcgaggcggcagatgatgccgtctacagcctgccgctaaaggaa
cagctgaagcgtaagcacaaacccgactctgaccagcatcccagcaccagcaagcgattg
aaggaggggaacatcaaacccaagccagagtcagtgccagtgcgaggagtagtgaagaac
gagtcaataacctgcatcagtgacgaggacgacgatgtcgtagaagttcctatacagaaa
aagcccataccacaggcagcggaagcaccgagcaagcgccagcagaagcgtcagcagttc
cagcgcttcagggggggcaaggcacgtggcaatcatccccagagctccagtcaaccggtg
gtccagcagcccaagccacaaggcaacaactttgactacaagaacgtggacttccggcag
ttccagggcggagcacaacgagcccgtggcacagagatcaagcagacaatacgcggaaag
aatcgtcccaacaatcggaataacaagcagtttaacaagctttttacatttagtaatgta
aggaaagatggcaagaaatag
DBGET
integrated database retrieval system