Drosophila miranda: 108155414
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Entry
108155414 CDS
T06132
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dmn
Drosophila miranda
Pathway
dmn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108155414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmn03021
]
108155414
03036 Chromosome and associated proteins [BR:
dmn03036
]
108155414
Transcription machinery [BR:
dmn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108155414
Chromosome and associated proteins [BR:
dmn03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108155414
PBAF complex
108155414
GBAF(ncBAF) complex
108155414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
108155414
NCBI-ProteinID:
XP_017141701
LinkDB
All DBs
Position
2:complement(22557241..22562165)
Genome browser
AA seq
1259 aa
AA seq
DB search
MMNTLGPKKDGSPNIDFFQSSETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLIQ
FLQYVEAKLGKNSAEPPATRIPMRCFLDFKNGGGLCIIFSTMFRFRAEQRGKKFDFSIGK
NPTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKGFEGRLREILDNRRVEIVTDEE
DATHIVYPIVDPHPDEYARPIFKRGSHVMLHWYYFPESYDSWTVNSFDLPENIPENPESP
AERWRVSASWILDLEQYNEWMAEEDYEVDEQGKKKTHKQRMSIDDIMSFGDEKKKPSTST
GKQKRRRSPSPTTSTSKPGKRKRSPAVIHKKTRNDEEDEDLTRDLDDPPAEPNVQEVHKA
STALQSTSSPAPGSKSRGDNDMMPIKGGTMTDLDDEMTGGSAAQALSTGDGDNSQTGKTS
DNSNTQEFSSSVKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSK
TPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAD
LRPTPMGPPPTSHFHILSDTPSGLQAINPQKTQQPSAAKTLLDLDKKPLGKDGSLESLGG
DKSGTLGAIKTEALENGAASGLSSGVSQFGLKLDQYAKKPAAMRNRTAASMSREWTDQET
LLLLEGLEMHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPF
SKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDIHIKSVKKASAGG
KFNPNFGLSNSGIAGTGNDKEDEESKDGSSGSATAAGGAGGGAGSDEEMKDLTKKDDDAK
SKDKTKSDTKTNTNTDSSSTSSSSSSSTATSNTNTTTDNKKPKDSSDKASKTDKSNKSSP
TDPTAAASAAVVPSGSGAGGVDVDIKTEENSGDGETKDGSDGSKDGSSGQGSNKEGAFSE
NNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMER
EREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQELQGQAAAAGTMILQQQQQ
QQPTPPPQQPQQQQPLPQQQQPLPQHLHAQQQQPLPPHQAQVQPQPLAAPSAQHQPLPPH
ISAVGVGPPPNGAPFAAPPMATAAAGGAPPPGGGIPAVLATASEQAGAAAAVAAAAAAAA
AAAQPQVPTAMDTTPPISAPVAEAPSAPGGPVVLPPAVSSIPPASVVATVAAPAVAPPS
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacacactgggccccaagaaggacggaagtccgaatattgacttctttcagtcg
tcagagacgctgcagggcttcgaatcaatcaggcaatggctgcaaaagaattgtaaaaag
tacctggcgcacagctcggagcccattaccaaggagtccctggctcaattgcttatacaa
tttctgcaatatgtggaggcgaagctgggcaaaaattcggccgagccgccggcgaccaga
attccgatgcgttgctttctggactttaagaacggcggaggtctgtgcatcatcttctcc
acgatgttccgattccgcgcggagcagcggggaaagaagtttgacttttccattggaaag
aatcccacgaggaaggatcccaacattcagctgctgatcgagatcgagcaggctctggtg
gaggcggatctataccgcataccctacatctatataaggccggagatcgagaagggtttc
gagggaaggctgcgcgagattctcgacaatcggcgggtagaaatcgtcaccgacgaggag
gatgccacgcacattgtctatcccattgtggatccgcatccggacgagtatgcgcgtccc
attttcaagcgtggcagtcatgtgatgctgcattggtactactttcccgaatcctatgat
tcgtggacggtcaacagcttcgatttgccggagaatattcccgagaatccggaatcgccg
gctgagaggtggcgcgtctcggcctcctggatcctcgacttggagcagtacaacgaatgg
atggccgaggaggactatgaggtggatgagcagggcaagaagaagacccacaagcagcgc
atgtccatcgacgacatcatgtcctttggcgatgaaaagaaaaagcccagcaccagcact
ggcaagcagaagcgacgtcgctcgccctcgcccacaacatccacatcgaagcccggcaag
cgcaagcgttccccggccgtcattcacaagaaaaccagaaacgatgaggaagatgaagat
ctgacgcgggacctggatgatccgccggccgagccgaatgttcaggaggtgcacaaggcc
agtacggccttgcaatcgacttccagtccagcaccaggtagcaaatcgcgtggcgacaac
gatatgatgcccatcaagggtggaacgatgacggatctggacgatgagatgactgggggg
agtgctgcccaggcactgtccacaggcgatggggacaactcgcagacgggcaagacgagc
gacaacagcaacacccaggagttctcctcgtccgtcaaggaggatatggaggataatgtg
accgagcagacgcaccacatcattgtgccctcgtattcggcatggtttgactacaactcc
atccacgtgatcgagaagcgcgcgatgccagagttctttaacagcaaaaacaaatccaag
accccagagatctacatggcctatagaaactttatgatagatacctacagactcaatccc
acggagtacttgaccagcaccgcctgcagacgcaatctagcgggagatgtgtgtgccatt
atgcgggtgcatgccttcctggagcagtggggattgatcaactaccagatcgatgcagat
ctgcgtcccacgcccatgggaccgccgcctacctcgcatttccatatcctgtcggacacg
ccctcgggcctgcaggccattaatccgcaaaaaactcagcagccatcggccgccaagacg
ctgctggatctcgacaagaagccgctgggcaaggatggtagcttagagagcttgggcggc
gacaagagcggcacccttggcgccatcaagacggaggccttggagaatggagccgccagt
ggattgagctctggcgtgagccaatttggcttgaagctggatcagtatgccaagaagccg
gctgccatgagaaaccgcacggcggccagcatgtccagggagtggaccgaccaggagaca
ctgcttctgctcgagggtctggagatgcacaaggacgactggaacaaggtgtgcgagcat
gtgggctcccgcacccaggacgagtgcattttgcatttccttcggctgcccatcgaagat
ccctatctggaggacgatggcggcttcctgggacccctgggctgtcagcccatcccattc
agcaagagcggcaatcccattatgtccacggtggcatttttagcctctgtggtggatccc
cgggtggccgccgcagccgccaaggcagccatggaggaatttgcagccattaaggacgag
gtgccagccaccattatggacatccatataaagagcgtgaagaaggcctccgccggcggc
aagttcaatccgaactttggtttgtccaacagcgggattgcgggcactggcaacgacaag
gaggatgaggagagcaaggatggtagcagcggctcggccacagctgccggtggcgcaggc
ggaggagcaggaagtgatgaggaaatgaaggaccttaccaagaaagacgacgatgccaag
tccaaagacaaaacgaaatcggataccaagacgaacacaaacacagactctagttccaca
tcatcatcatcatcatcatcgacagccacaagcaacacgaacactactacagataataag
aaaccgaaagattcgtcggataaagccagcaaaacagacaaatcaaataaatcctcaccc
acagacccaacagcagccgcatcagcagcagtcgtccccagtggcagtggagcaggcgga
gtggatgttgacatcaaaacggaggagaacagtggcgacggggagacaaaggatggcagc
gatggctccaaggatggctcgagtggccaaggcagcaacaaggagggagccttcagtgag
aacaacatgcagacggcagcagcagccgctctggcctcggcggccgtcaaggccaagcat
ttggctgccctcgaggagcgcaagatcaagtctttggtggccctgctggtcgagacgcaa
atgaagaagctggagatcaaactgaggcactttgaggagctggaggctaccatggagagg
gagcgcgagggcctggagtaccagcgacagcagctgattacagagcgtcagcagttccat
ttggagcagttgaaggccgccgagttccgggcccgccagcaggcgcatcatcgtctgcag
caggagctgcagggccaggcagccgctgccggtaccatgatcctgcaacagcagcagcaa
caacagccgacgccgccaccgcagcagccacaacagcagcagccactgccacagcagcag
cagccactgccacagcatctgcatgcgcagcagcagcagccactgccgccccatcaggcg
caagtgcagccccagccgttggccgcaccatcggcacagcatcagcccctgccgccgcac
atatcagctgtgggcgtgggtccgccgccaaatggggcgccttttgcagcgccgcccatg
gcgacggcagctgctggtggagcacctccaccaggaggcggaatacctgccgttttggcc
actgccagcgaacaagcaggagcagcggcagcagtcgccgcagcagcagccgcagcagca
gcggcggcgcaacctcaggtacccacagcgatggataccacaccgccaatcagtgcacct
gttgccgaggccccaagtgcaccggggggaccggtggtgttgccgcccgctgtctcaagc
attcctccggccagcgttgtggctactgtggctgctccagccgtcgctcctccatcttaa
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