Drosophila miranda: 108155469
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Entry
108155469 CDS
T06132
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
dmn
Drosophila miranda
Pathway
dmn03020
RNA polymerase
dmn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108155469
09124 Replication and repair
03420 Nucleotide excision repair
108155469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmn03021
]
108155469
03400 DNA repair and recombination proteins [BR:
dmn03400
]
108155469
Enzymes [BR:
dmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108155469
Transcription machinery [BR:
dmn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108155469
DNA repair and recombination proteins [BR:
dmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108155469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
108155469
NCBI-ProteinID:
XP_017141779
LinkDB
All DBs
Position
2:11869766..11874048
Genome browser
AA seq
1176 aa
AA seq
DB search
MMYDNEEELFEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPAIELQAEAQHTSGEVETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLT
YSAPLYVDITKTKNVEGLDPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKTEIRSCLEHSSRPTSTLWVNM
MARGSQNIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT
QKFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVS
EVSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLKKTHVEMLKERDYNNYSWQVLVAS
GVVEYIDTLEEETVMIAMSPYDLKQDKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINS
IVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSENKRVGDQEENFEKPHRGTCQ
GMRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELDSNTKRFAKRDASTFLRN
SETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTC
EGLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEY
GYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGR
ARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECK
GCKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVN
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgacaacgaggaagagctgttcgaggaagagaatgcagaggagatctcccac
gagctgtggcaggaggcctgctggatcgtaatcaacgcgtacttcgatgagaagggtctg
gtgcggcagcagctggacagcttcgatgagttcattcagatgtctgtgcagcgcattgtg
gaggactcgccggccatcgagctgcaggcagaggcacagcacacatccggggaggtggag
acgccgccgagattctcgcttaagttcgaacagatctatctgtcgaagccgacgcattgg
gagaaggatggttcgcccagtcccatgatgccgaacgaggcccgtctgcggaacctcacc
tactcggcccccctgtacgtggacatcacaaagacaaagaatgtggagggcctggatccc
gtggagacgcagcaccagaagaccttcatcggcaagattcccattatgctgagatccacg
tactgcctgctctcccagctgacggatcgtgatttgaccgagttgaacgagtgcccgctg
gatcccggcggctacttcatcatcaacggctccgagaaggtgctgattgcccaggagaag
atggccacgaacaccgtgtatgttttcagcatgaaggatggcaagtacgccttcaagaca
gagatacgctcctgcctggagcacagctcgcgacccacatccactctctgggtgaacatg
atggcccgaggctcgcagaacatcaagaaatccgccattggccagaggatcatcgctatc
ctgccgtacatcaaacaggagatacccattatgattgtgttccgtgccctgggattcgtg
gccgatcgtgacatcctcgagcacatcatctacgattttgacgatccggaaatgatggaa
atggtcaagccatctctggacgaggccttcgtggtgcaggagcaaaacgtggccctcaac
ttcatcggagcgcgaggcgcccggcccggcgtgacgaaggacaagcgtataaagtacgcc
aaggaaatcctccagaaggaaatgctgccccatgtgggcgtctccgatttctgcgagaca
aagaaagcgtatttcctcggctacatggtgcaccggctgctgctggcctcgctgggtcgc
cgggagctggacgatcgcgatcattacggcaacaagcgcctggatctggccggacccctg
ctggccttcctcttccgcggcctctttaagaacctgatgaaggaggtgcgaatgtacaca
cagaagttcatcgatcgtggaaaggacttcaatctggagctggccatcaagacgaacatc
atcaccgacggcctgcgctactccctggccaccggcaactggggcgaccagaagaaggcc
catcaagcgcgtgccggcgtctcccaggtgctgaaccggctcaccttcgcctccaccctg
tcccatctgcgtcgcgttaactcgcccattggccgcgacggaaagttggccaaaccccgc
cagctccacaacacgctctggggcatgctgtgtcccgccgagactccggagggagccgct
gtcggtttggtcaagaatctggctctgatggcctacatatccgtaggctcacagccgtcg
cccattctggagttcttggaggagtggtccatggagaatctagaggagattgcaccctcg
gcgattgcggatgccaccaaaatctttgttaacggctgctgggtgggcatccatcgggat
cccgagcagctgatggccacgctccgaaaactgcgtcgccagatggacattatcgtgtcg
gaggtgtcgatgatccgtgatattcgcgatcgtgagattaggatctacacagatgcgggt
cgcatctgtcggccgctactgattgtggagaatggatcgctgctgctgaagaagacccat
gtggagatgttgaaggagcgcgactataacaactacagctggcaggtgctggtggcctcc
ggcgtggtggagtacatcgatacccttgaggaggaaacggtcatgatcgccatgtcgccg
tatgatctgaaacaggacaaggactatgcctactgtacgacctacacccactgcgagatt
catccggccatgatcctgggcgtctgcgcctccattatacccttccccgatcacaaccag
agtccgcgtaacacctatcaaagtgctatgggcaaacaagctatgggtgtgtacatcacc
aatttccatgtgcggatggacacgctggcccatgttctatactatcccatgaagccgctg
gtcaccacccgatccatggagtatctgcgcttcagagagctgcccgccggtatcaattcg
attgtggccattctctgctacacgggctacaaccaggaggattctgtcatcctgaatgcc
tcggcggtggagcgagggttcttccgatcggtgttctaccggtcgtacaaggattcggag
aacaagcgtgtgggcgatcaggaggagaactttgaaaaaccccatcgcggcacctgccag
ggcatgaggaatgcccactacgacaagctggacgacgacggcatcattgctcctggcatt
cgtgtctctggcgacgatgtggtgattggaaagaccatcaccctgccggagaacgacgac
gagctggatagcaacaccaagaggtttgccaagcgagatgcctccaccttcctgcgtaac
tccgagacgggcatcgtggaccaggtgatgctgaccctcaacagcgagggctacaagttc
tgcaagattcgagtgcgctccgtgcgcattccacagatcggcgacaagtttgcctcccgt
cacggacagaagggaacgtgtgggatccagtatcggcaggaggacatgcccttcacctgc
gagggactggcccctgatatcatcatcaatccccatgccatcccctctcgtatgacaatc
gggcatttaatcgagtgtctgcagggcaagctgggctccaacaagggggaaatcggtgat
gccacgcccttcaacgatgccgtcaacgtgcagaagatctccactttccttcaggagtat
ggctaccatctgcgtggcaacgaagtcatgtacaatggccacacaggacgcaagatcaat
gctcaggtattcttgggacccacatactaccagcgcttgaagcacatggtggacgacaag
atccattcacgtgcccgcggccctgtccagattctagtgcgacagcctatggagggcaga
gcccgtgacggcggcctgcgtttcggtgagatggagcgcgattgccagatatctcacggt
gccgcccagttcctcagggagcgtctctttgaggtctccgatccgtatcgcgtccacata
tgcaacttctgcggcctgatcgctatcgccaatctgcgcaacaacacgttcgagtgcaag
ggctgcaagaacaagacgcaaatctcccaggtgcgccttccgtacgcggccaagctgctc
ttccaggagctgatgtccatgaacattgcgccccgtctgatggtcaactga
DBGET
integrated database retrieval system
