Drosophila miranda: 108155801
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Entry
108155801 CDS
T06132
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
dmn
Drosophila miranda
Pathway
dmn03013
Nucleocytoplasmic transport
dmn03015
mRNA surveillance pathway
dmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108155801
09122 Translation
03013 Nucleocytoplasmic transport
108155801
03015 mRNA surveillance pathway
108155801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108155801
03041 Spliceosome [BR:
dmn03041
]
108155801
03009 Ribosome biogenesis [BR:
dmn03009
]
108155801
03012 Translation factors [BR:
dmn03012
]
108155801
Enzymes [BR:
dmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108155801
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108155801
mRNA cycle factors
Stress granule specific factors
108155801
Spliceosome [BR:
dmn03041
]
Complex C
Other components
EJC/TREX
108155801
Ribosome biogenesis [BR:
dmn03009
]
Eukaryotic type
90S particles
Helicases
108155801
Translation factors [BR:
dmn03012
]
Eukaryotic type
Initiation factors
eIF-4
108155801
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
TniB
AAA_30
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
108155801
NCBI-ProteinID:
XP_017142371
LinkDB
All DBs
Position
2
Genome browser
AA seq
399 aa
AA seq
DB search
MARKNAQAEDLSNVEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSIKPI
VKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLCLSPTRELAVQIQKVILALGDM
MNVLCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEM
LNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIK
QFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMP
QKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG
RKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaagaatgcccaggccgaggatctctcgaacgttgagttcgagaccagcgaa
gatgtggaggtaatacccacttttaatgccatgaatctgaaggaagagctgctacgcggc
atctatgcgtacggttttgagaagccttcggctattcagcagcggagcatcaagcccatt
gtaaagggacgcgatgttattgctcaggctcagtctggtacaggcaaaacggccacattc
tccatatccattctgcagagtctggacaccactttgcgggagacgcaggtgctgtgtctg
tctcccacccgcgagttggcggtacaaatccagaaggtcatactggccctgggcgatatg
atgaatgtgctgtgtcacgtgtgcattggcggtacaaatctgggcgaggacattcgcaag
ctggactacggccagcacattgtgagcggcacccctggacgtgtgtttgacatgattaag
cggcgtgttctgcgcaccagagccatcaagatgctggtgctcgacgaagccgatgagatg
ctgaacaagggattcaaggaacaaatctatgacgtttaccggtatttgccacctgcaacg
caggttgtgctcatctctgccaccttgcctcatgagatccttgaaatgacctcaaagttc
atgacagatcccattcgcatactggtcaagcgcgatgagttgaccctggaaggcatcaaa
cagttctttgtggctgtcgagcgggaggagtggaaattcgacaccctctgtgatctgtac
gatacattaaccatcacccaggctgtcatcttctgcaacaccaagcgcaaggtggactgg
ctgacagagaagatgcgcgaggctaatttcaccgtcagctccatgcacggcgatatgccg
caaaaggagcgagatgagatcatgaaggaattccgcgccggccagtcgcgtgttctcatc
accacagatgtgtgggcgcgcggcattgatgtgcagcaagtatccttggtcatcaactac
gacttgcccaacaaccgtgagctgtacatccatcgtattggccgatcgggtcgttttgga
cgcaagggtgtcgccattaactttgtcaaatctgatgatattcgcattttgcgagatatt
gagcaatactattctacacaaatcgacgagatgcccatgaacgtggccgacttgatctaa
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integrated database retrieval system
