KEGG   Drosophila miranda: 108155804
Entry
108155804         CDS       T06132                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
dmn  Drosophila miranda
Pathway
dmn03013  Nucleocytoplasmic transport
dmn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dmn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108155804
  09122 Translation
   03013 Nucleocytoplasmic transport
    108155804
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmn03019]
    108155804
   03041 Spliceosome [BR:dmn03041]
    108155804
Messenger RNA biogenesis [BR:dmn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     108155804
Spliceosome [BR:dmn03041]
 Complex C
  Other components
   EJC/TREX
    108155804
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108155804
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 EIF3I Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_EML Beta-prop_HPS5 Beta-prop_WDR36-Utp21_1st Tricorn_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_1st RMC1_N eIF2A WDR90_beta-prop_4th DSE1_N NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_ELP1_1st TRM82_WD WD40_RFWD3 Beta-prop_NUP159_NUP214 PD40 Beta-prop_TEP1_C Beta-prop_DCAF12 PAC11 ASA1 Beta-prop_WDR41 DPPIV_N Beta-prop_Nup120_160 WD_LRWD1 Beta-prop_DCAF4 Tricorn_N
Other DBs
NCBI-GeneID: 108155804
NCBI-ProteinID: XP_017142374
LinkDB
Position
2
AA seq 320 aa
MNRTEQTFEDLRSFFRSHSKIREQRAHTSKVHSVCWNADGRHLASGSFDKTVAVYTLERD
RLIKGNIYRGHTASVDQLCWHKTDPNQFATASGDKTVRIWDIRAGKCASVTNTKGENINI
AWSPDGKTIAVGNKEDLITFIDTRTTKIRVEEQFSCEVNEISWNNTNDLFFLTNGMGCIN
VLSYPSLEHQLALKGHPANCICIEFGPTGKYFATGSADAQVSLWDATELACLRMISRLEW
PVRTISFSHDEKLIASASEDLLIDVAFTETGERITDIHVDASTFTVAWHPKEYLLAYACD
EKDVERRRDIGNVKIYGFPE
NT seq 963 nt   +upstreamnt  +downstreamnt
atgaaccgtacagagcagacatttgaggacctgaggtcgttctttcgaagtcacagcaaa
atacgcgagcagcgggcccacacgtccaaggttcactccgtctgctggaatgctgatggt
cgccacttggcatcgggttcgtttgacaagaccgtggcggtgtacaccttggaacgcgat
cgcctcatcaagggcaacatctaccgggggcacaccgcgtccgtggaccagttgtgctgg
cacaaaaccgatccaaatcagtttgccactgcgagtggcgacaagaccgttcgcatctgg
gacatacgcgctgggaaatgtgcttcagtgaccaacaccaagggagagaacataaacata
gcctggtctccggatggcaagacgattgcggttggcaacaaggaagacctaatcacattc
attgacacgcgcacgaccaaaatacgcgtcgaggagcagttcagctgtgaagtaaatgag
atatcatggaacaatacaaacgatttgttcttcctcaccaacggcatgggctgcattaat
gtgttaagctatcccagcctggagcaccaactggcactcaaagggcatcctgccaactgc
atttgcatcgagttcggacccacaggtaaatattttgccactggttcagccgatgcccag
gtctcgctttgggacgccaccgaactggcctgcctacgcatgattagccgcctggagtgg
cctgttcgtaccatatcctttagtcacgatgaaaaactgatagcctctgccagcgaggat
cttctcattgacgttgccttcacggagacgggggaacgtatcaccgacattcatgtcgat
gcctctactttcacggtggcctggcatccaaaagagtacctcttagcctatgcctgcgac
gagaaggacgtcgaacggcgccgcgatattggcaatgttaaaatatacggctttcctgag
tag

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