Drosophila miranda: 108156729
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Entry
108156729 CDS
T06132
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
dmn
Drosophila miranda
Pathway
dmn04140
Autophagy - animal
dmn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108156729
04148 Efferocytosis
108156729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmn04131
]
108156729
Membrane trafficking [BR:
dmn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108156729
Hops complex
108156729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
VPS11_N
zf-C3HC4_2
zf-RING_2
zf_RING_Vps8_fungal
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
zf-C3HC4
VPS18_RING_C
DUF562
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
108156729
NCBI-ProteinID:
XP_017143873
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Position
2:19981538..19984226
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AA seq
857 aa
AA seq
DB search
MNTTVLEWKKVNFFDIVGLPYVKFPNIEEITCHCFNLTKSDAGESNNTLVLCDKNGQLHV
YFPNWECISFKSQHCQRHIRQCALTSNNLLATVTQDATFVVHIDIYDLKKLTKKQGAPLI
ASATINTTSPTTCINAVIEDKILILALGFENGDILLHYGKMNRFILTNSRRHSISAHAIN
GIHFDIRRQSTDKQTTYMFVTCFDGVFCFTIKEKGAIDQKYILDNNKHAYNHCCTMRKAS
NAELDDSMLVVGREDAIYCYTRDGRGPCYAIEGEKKCLDWVGHYLIVVVQSPKSFFSDKT
KVTLIVVDTENKIIVFSKQLEDFLFTISENEVCYIITNTEDRDNSCTNIFKLQQYNTNTK
IRLLIEQSMYNIALQLLSREALVSSYDTACVRFQYGNHLVLKGDISRAVIEYTKTIGFIK
PYDVISKLLFSRYTEYLKEYVYELLKSNHSKNKHLKLFKLLDEKKCNPKNDFNPGNNVFF
NTTGNVYLDTLLDKPSSNLNSANGTQSKSFEGNEILHFHLEYGPESLMKNPETYLKIVKS
VIIGNTTKNILCFFSILSEYNEFCANLLSEIIGSYPTCDEQLYDYLLILYLGLWRDKKIT
TGFVLDFLNNGRLRLEKVLIICRLYIFLNGIKQFHKNLNNADIVTDGGSDKCVHSLIKSY
PDLNYVFELKTSSLLMILNSGFRNNSIHALQLKPFIRERIVQNILDSRNELQTIENLNKK
IKKADFTLSLYTNNPIEFRNSSCDICRQSLNMQSVYFLCQHSFHKQCLIYNKLRRGEEAI
CVACSGEINYSPDQNVYLESTDTITVISKVISMGIVEIATNSGFSRNITPIKEPYEIKST
TSRNPFSLNVNISEGIS
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaatactacagttttagaatggaaaaaagtcaacttttttgatattgttggattgcct
tatgtaaaattcccgaatattgaggaaattacgtgtcactgtttcaatctgaccaaatct
gatgctggtgaaagtaataatactctagtgctctgtgacaaaaatggacaactacatgtt
tattttcctaactgggagtgcatatcctttaaaagtcaacattgccagcgccacatcagg
caatgtgcactgacgtctaataatttactagcaactgtcacacaagatgcaacatttgta
gtacacatagatatatacgatttaaaaaagttgacaaaaaaacaaggagctccactgatt
gcatccgcaactattaatacaacaagtcctaccacatgcatcaatgcagtcattgaggat
aaaatactgatattagccttaggctttgagaatggggacattctgttgcattatggaaaa
atgaacagatttattttgacaaatagtcgccgccactcaatatctgcacacgcaattaat
ggaatacatttcgacatcagacgtcaaagcacggataaacaaactacatatatgtttgtg
acatgttttgatggcgtgttttgctttacaatcaaagaaaaaggcgccattgatcaaaaa
tatatactggataataataaacatgcttacaatcattgttgtacgatgcgcaaagcaagt
aatgcagaattagatgattctatgttagtagtagggcgagaagatgctatatactgctac
actcgtgacggaaggggcccttgctatgccattgaaggggaaaaaaaatgtttggattgg
gtaggccattatctcatcgttgtagtccaaagtccaaaaagttttttttcggataagacg
aaggtgactctaattgtagtggatactgaaaacaaaattattgttttttctaaacaactt
gaagattttctttttactatcagcgaaaacgaagtatgttacattatcactaatactgaa
gatagggataactcttgtacaaacatattcaaattacagcagtacaatacgaatacaaaa
attcgacttctaattgaacaaagtatgtacaatattgctctgcaattgttatcaagagaa
gcccttgtttcttcatatgatactgcttgcgtgcggtttcaatacggaaatcatttagta
cttaagggcgacataagtagagcagtcatagaatatactaaaacaattggctttattaaa
ccctatgatgtgatttccaaactactgttttccaggtacactgaatatctaaaagaatat
gtatatgaacttttaaaaagtaatcattctaaaaacaagcacctaaaactttttaaatta
cttgatgagaaaaagtgtaacccgaagaatgatttcaatcctggcaataatgtttttttc
aataccacgggtaatgtttatctggatacgcttttagataaaccaagcagtaatttaaat
tctgcaaatggaactcaatccaaaagttttgaaggcaatgaaattttacatttccattta
gaatatggaccagaatcactaatgaaaaacccagaaacttatttaaagattgtcaaatcg
gtaattattggaaacacgacaaaaaacattctttgttttttttccattttgtcggaatat
aacgagttttgcgccaacttattatcagaaataattgggagttaccccacatgtgatgag
caattatatgattatttactaattctgtatcttggactttggcgtgataaaaaaataacc
accggttttgttttagattttttgaataatggtcgcctacgtcttgaaaaagttttaatt
atatgtcgactctatatatttttgaatgggattaaacaatttcataaaaatctgaataac
gcagatatagtaaccgatggaggatcggacaaatgcgtacacagtcttattaagagttat
ccagatcttaattacgtctttgaactgaagacaagctcattattaatgattttaaatagt
ggattccgaaataattcgatacatgcattgcaacttaaaccttttattagggaaaggata
gtccaaaatattttggactcaagaaacgaattgcaaactattgaaaatttaaataaaaaa
attaaaaaagcagattttacgctttctctttatacaaataatccaatagaatttcgcaat
agttcatgtgatatctgtcgccaatcgctaaatatgcaatctgtctatttcctttgtcaa
cattctttccataaacaatgtcttatctacaataagttgagacgtggggaagaagcaata
tgtgttgcttgcagtggcgaaattaattactctcccgaccaaaatgtttatttagagtca
acagacaccattacagtgatttcaaaggtaatttctatggggattgtagaaatagcaacc
aatagcggattctccagaaatattactccaataaaagagccctatgaaatcaaaagtaca
acctcgagaaatccctttagtttaaatgttaatatttccgaaggcatatcttag
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